Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

AR 1 dataset

ChIP PC-3 GSE54110.AR.PC-3 113 bp overlap

BRD4 5 datasets

ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 381 bp overlap

ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 144 bp overlap

ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 255 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 397 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 85 bp overlap

Bcl11B 1 dataset

Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 411 bp overlap

CBX1 1 dataset

ChIP DKO GSE135580.CBX1.DKO 167 bp overlap

CDX2 1 dataset

ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 188 bp overlap

CHD4 1 dataset

ChIP RH5 GSE155861.CHD4.RH5 233 bp overlap

CLOCK 1 dataset

ChIP BA10_2 GSE96659.CLOCK.BA10_2 153 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 588 bp overlap

ERG 1 dataset

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 258 bp overlap

EZH2 1 dataset

ChIP A673 ENCFF790MVL 548 bp overlap

FLI1 1 dataset

ChIP NB4 GSE23730.FLI1.NB4 157 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 161 bp overlap

ChIP DE DE-FOXA2-1 600 bp overlap

ChIP DE DE-FOXA2-2 600 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 220 bp overlap

GATA2 2 datasets

ChIP SH-SY5Y ENCFF485YIB 316 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 266 bp overlap

GATA3 3 datasets

ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 163 bp overlap

ChIP Kelly GSE65664.GATA3.Kelly 227 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 144 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 600 bp overlap

ChIP DE DE-GATA4-2 600 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 600 bp overlap

ChIP DE DE-GATA6-2 600 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 600 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 600 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 592 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 518 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 600 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 600 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 250 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 148 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 95 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 363 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 318 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 207 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 286 bp overlap

LMO2 1 dataset

ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 104 bp overlap

MAML3 1 dataset

ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 187 bp overlap

MEIS1 1 dataset

Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 600 bp overlap

MYOD1 5 datasets

ChIP RD GSE137168.MYOD1.RD 353 bp overlap

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 392 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 454 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 191 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 303 bp overlap

MYOG 2 datasets

ChIP RH4 GSE83726.MYOG.RH4 267 bp overlap

ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 181 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 110 bp overlap

RARA 1 dataset

Motif DE_72h DE_72h-RARA_MA0730.1 17 bp overlap

RARA::RXRG 1 dataset

Motif DE_72h DE_72h-RARARXRG_MA1149.2 17 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 168 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 380 bp overlap

RUNX1 1 dataset

ChIP NB4 GSE81992.RUNX1.NB4 254 bp overlap

Rarb 1 dataset

Motif DE_72h DE_72h-Rarb_MA0858.1 17 bp overlap

Runx1 1 dataset

Motif DE_72h DE_72h-Runx1_MA0002.3 9 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 600 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 600 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 408 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 569 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 517 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 493 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 172 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 157 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 232 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 449 bp overlap

SOX21 1 dataset

Motif DE_72h DE_72h-SOX21_MA0866.1 15 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 211 bp overlap

SPI1 4 datasets

ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 238 bp overlap

ChIP EM-3 GSE128834.SPI1.EM-3 402 bp overlap

ChIP NB4 GSE128834.SPI1.NB4 171 bp overlap

ChIP NCI-H929 GSE56857.SPI1.NCI-H929 164 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 278 bp overlap

Sox1 1 dataset

Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap

Sox6 1 dataset

Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 290 bp overlap

Genome Browser