chr11 : 113,389,169 113,390,063
894 bp 64 TFs 2 linked genes
This 894 bp open chromatin element is linked to ANKK1 and TTC12 and is bound by 64 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ANKK1 1.4 kb Proximal Proximity
TTC12 75.0 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:113,384,169 – 113,395,063
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
ASCL1 2 datasets
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 136 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 211 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 346 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 319 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 464 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 284 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 249 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 686 bp overlap
ChIP hESC GSE26097.EOMES.hESC 156 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 498 bp overlap
FERD3L 1 dataset
Motif DE_36h DE_36h-FERD3L_MA1485.1 14 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 486 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 230 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 894 bp overlap
ChIP DE DE-FOXA2-2 705 bp overlap
GATA1 2 datasets
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 157 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 147 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 267 bp overlap
GATA3 1 dataset
ChIP T-47D GSE51274.GATA3.T-47D 216 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 244 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 247 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 894 bp overlap
ChIP DE DE-GATA4-2 894 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 894 bp overlap
ChIP DE DE-GATA6-2 894 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 665 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 820 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 496 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 894 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 832 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 735 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 894 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
HOXB9 1 dataset
Motif DE_36h DE_36h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_36h DE_36h-HOXC10_MA0905.2 9 bp overlap
HOXC9 1 dataset
Motif DE_36h DE_36h-HOXC9_MA0485.3 9 bp overlap
HOXD11 1 dataset
Motif DE_36h DE_36h-HOXD11_MA0908.2 9 bp overlap
Hoxa11 1 dataset
Motif DE_36h DE_36h-Hoxa11_MA0911.2 9 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 390 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 286 bp overlap
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 132 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 314 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 275 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 489 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 173 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 429 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 653 bp overlap
ChIP hESC GSE18292.NANOG.hESC 223 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 587 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 521 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 472 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 430 bp overlap
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
NHLH2 1 dataset
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 417 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 465 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 184 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 513 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1618.2 9 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 213 bp overlap
RELA 3 datasets
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 161 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 148 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 150 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SCRT1 2 datasets
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 304 bp overlap
SCRT2 1 dataset
Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 188 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 894 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 707 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 475 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 822 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 827 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 148 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 426 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 395 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 500 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 97 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 349 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 217 bp overlap
TWIST1 1 dataset
Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap
ZBTB18 1 dataset
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap