chr11 : 28,969,757 – 28,970,293
536 bp 38 TFs 0 linked genes
This 536 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:28,964,757 – 28,975,293
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 444 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 162 bp overlap
CHD4 1 dataset
ChIP A-549 ENCSR550SCU.CHD4.A-549 266 bp overlap
CREB1 2 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 205 bp overlap
ChIP A-549 ENCSR000BRC.CREB1.A-549 183 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 200 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 182 bp overlap
EP300 2 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 335 bp overlap
ChIP A549 ENCFF476KCM 445 bp overlap
FOSL2 1 dataset
ChIP A-549 ENCSR000BQO.FOSL2.A-549 178 bp overlap
FOXA1 61 datasets
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 243 bp overlap
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 256 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 443 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 240 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 233 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 341 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 294 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 271 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 317 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 431 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 351 bp overlap
ChIP 22Rv1_TFS_Crispr-36 GSE123618.FOXA1.22Rv1_TFS_Crispr-36 278 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 220 bp overlap
ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 370 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 303 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 352 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 342 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 342 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 480 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 497 bp overlap
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 367 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 375 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 174 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 158 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 178 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 133 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 212 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 187 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 256 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 202 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 218 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 251 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 332 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 366 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 255 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 494 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 147 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 180 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 245 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 199 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 272 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 320 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 291 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 317 bp overlap
ChIP T-47D_JC4746 GSE126004.FOXA1.T-47D_JC4746 191 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 342 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 328 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 245 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 199 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 154 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 207 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 364 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 360 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 337 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 315 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 390 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 369 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 388 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 195 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 321 bp overlap
FOXA2 11 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 274 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 369 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 338 bp overlap
ChIP DE DE-FOXA2-1 536 bp overlap
ChIP DE DE-FOXA2-2 536 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 536 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 527 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 536 bp overlap
ChIP PC-3_GSK GSE148982.FOXA2.PC-3_GSK 270 bp overlap
ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 219 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 396 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 227 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 209 bp overlap
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 149 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 349 bp overlap
ChIP A549 ENCFF226FVV 199 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 409 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 417 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 382 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 294 bp overlap
JUND 1 dataset
ChIP A-549 ENCSR000BRF.JUND.A-549 183 bp overlap
MAX 1 dataset
ChIP A-549 ENCSR000BTJ.MAX.A-549 187 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 441 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 392 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 263 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 215 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 187 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 178 bp overlap
ChIP A-549 ENCSR000BHE.NR3C1.A-549 189 bp overlap
ChIP A-549 ENCSR000BJT.NR3C1.A-549 113 bp overlap
POU5F1 2 datasets
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 274 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 179 bp overlap
RAD21 1 dataset
ChIP A-549 ENCSR000BUC.RAD21.A-549 235 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 247 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 137 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 214 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 482 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 335 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 440 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 320 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 153 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 301 bp overlap
SP1 2 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 331 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 162 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 303 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 536 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 156 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 82 bp overlap
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