chr11 : 27,625,016 27,625,854
838 bp 45 TFs 1 linked gene
This 838 bp open chromatin element is linked to LINC00678 and is bound by 45 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC00678 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:27,620,016 – 27,630,854
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 297 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 226 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 100 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 199 bp overlap
BRD4 1 dataset
ChIP MV4-11_IBET151_5000nM GSE120715.BRD4.MV4-11_IBET151_5000nM 174 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 261 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 312 bp overlap
CHD2 2 datasets
ChIP WA01 ENCSR000EBT.CHD2.WA01 193 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 137 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 159 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 668 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 344 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ESRRA 1 dataset
ChIP WTC11 ENCFF591YCA 425 bp overlap
ETS1 1 dataset
ChIP GM23338 ENCFF701IZH 377 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 437 bp overlap
ChIP WTC11 ENCFF812SCD 299 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 344 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 469 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 137 bp overlap
JUN 2 datasets
ChIP 786-O GSE86092.JUN.786-O 214 bp overlap
ChIP WTC11 ENCFF172UDA 361 bp overlap
JUND 3 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 172 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 348 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 271 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 404 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 167 bp overlap
NIPBL 2 datasets
ChIP WA09 GSE105028.NIPBL.WA09 433 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 382 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 339 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 838 bp overlap
ChIP H1 ENCFF566JSR 838 bp overlap
ChIP H1 ENCFF833NJP 764 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 165 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 170 bp overlap
SMAD3 1 dataset
ChIP WTC11 ENCFF815YYQ 357 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 165 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 178 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 286 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 145 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 53 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 397 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap