chr10 : 94,000,689 – 94,001,333
644 bp 43 TFs 1 linked gene
This 644 bp open chromatin element is linked to PLCE1 and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PLCE1 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:93,995,689 – 94,006,333
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 24 datasets
ChIP LNCaP ERP003503.AR.LNCaP 176 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 153 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 224 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 152 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 210 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 233 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 138 bp overlap
ChIP VCaP GSE148358.AR.VCaP 258 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 207 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 242 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 535 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 567 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 346 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 248 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 215 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 130 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 121 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 171 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 223 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 232 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 172 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 220 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 268 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 196 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 243 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 165 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 156 bp overlap
BRD4 3 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 165 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 224 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 248 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 340 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 156 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 202 bp overlap
CTCF 2 datasets
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 159 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 134 bp overlap
ESR1 8 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 213 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 127 bp overlap
ChIP MCF-7_Fulvestrant_HC11 GSE102882.ESR1.MCF-7_Fulvestrant_HC11 297 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 220 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 240 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 225 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 187 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 226 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 296 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 304 bp overlap
FOXA1 7 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 278 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 163 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 199 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 133 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 203 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 161 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 272 bp overlap
FOXA2 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 238 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 163 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 119 bp overlap
ChIP DE DE-FOXA2-1 373 bp overlap
ChIP DE DE-FOXA2-2 353 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 349 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 132 bp overlap
GATA2 2 datasets
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 218 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 204 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 173 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 188 bp overlap
GATA4 8 datasets
ChIP A-549 GSE85002.GATA4.A-549 206 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 275 bp overlap
ChIP DE DE-GATA4-1 326 bp overlap
ChIP DE DE-GATA4-2 644 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 262 bp overlap
ChIP foregut GSE117136.GATA4.foregut 412 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 559 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 395 bp overlap
GATA6 10 datasets
ChIP AGS GSE51705.GATA6.AGS 239 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 176 bp overlap
ChIP DE DE-GATA6-1 644 bp overlap
ChIP DE DE-GATA6-2 644 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 203 bp overlap
ChIP foregut GSE117136.GATA6.foregut 388 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 281 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 475 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 408 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 397 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 224 bp overlap
HNF4A 7 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 144 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 186 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 287 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 216 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 199 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 332 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 185 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 106 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 122 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 242 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 218 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 323 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 127 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 361 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 378 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 249 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHG.NR3C1.A-549 143 bp overlap
ChIP A-549 ENCSR000BHF.NR3C1.A-549 129 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 468 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 220 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 340 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 292 bp overlap
POLR2A 5 datasets
ChIP Peyer's patch ENCFF767HVN 358 bp overlap
ChIP stomach ENCFF607ZPU 263 bp overlap
ChIP transverse colon ENCFF193UMS 412 bp overlap
ChIP transverse colon ENCFF607LKE 356 bp overlap
ChIP transverse colon ENCFF610RWV 196 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 245 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 498 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 205 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 211 bp overlap
REST 2 datasets
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 495 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 450 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 288 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 164 bp overlap
ChIP Caco-2 GSE112946.SMAD4.Caco-2 124 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 192 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 324 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 445 bp overlap
SPI1 4 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 163 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 172 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 215 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 103 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 148 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 262 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 211 bp overlap
Huangfu Lab · Publications · Resources · Contact