chr10 : 58,063,761 – 58,064,594

833 bp 61 TFs 0 linked genes

This 833 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

61 transcription factors

AR 2 datasets

ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 171 bp overlap

ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 106 bp overlap

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 532 bp overlap

ARNTL 1 dataset

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 264 bp overlap

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

BAF155 1 dataset

ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 171 bp overlap

BRD4 3 datasets

ChIP HAP1 GSE108387.BRD4.HAP1 424 bp overlap

ChIP HAP1 GSE108387.BRD4.HAP1 196 bp overlap

ChIP HT29 GSE73319.BRD4.HT29 341 bp overlap

CDX2 3 datasets

Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap

ChIP LS180 GSE31939.CDX2.LS180 363 bp overlap

ChIP LS180_125 GSE31939.CDX2.LS180_125 312 bp overlap

CDX4 1 dataset

Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap

CEBPA 1 dataset

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

CTCF 1 dataset

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 539 bp overlap

DMRTA2 1 dataset

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 117 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 425 bp overlap

EOMES 1 dataset

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

FOXA1 2 datasets

ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 181 bp overlap

ChIP LS180 GSE140533.FOXA1.LS180 131 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 173 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 256 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 95 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 301 bp overlap

HNF1A 1 dataset

Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap

HNF1B 1 dataset

Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap

HOXB13 3 datasets

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

ChIP LNCaP GSE56288.HOXB13.LNCaP 197 bp overlap

ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 108 bp overlap

Hoxa13 1 dataset

Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap

Hoxd13 1 dataset

Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap

KDM5B 1 dataset

ChIP SUM159 GSE46055.KDM5B.SUM159 125 bp overlap

KLF4 1 dataset

ChIP HAP1 GSE130417.KLF4.HAP1 305 bp overlap

KLF5 1 dataset

ChIP ESO-26 GSE132680.KLF5.ESO-26 427 bp overlap

KMT2A 1 dataset

ChIP MOLM-13_CBS79-KO GSE114981.KMT2A.MOLM-13_CBS79-KO 191 bp overlap

MGA 1 dataset

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

MGA::EVX1 1 dataset

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 514 bp overlap

ChIP hESC GSE18292.NANOG.hESC 135 bp overlap

NCOR1 1 dataset

ChIP LS180_125 GSE39277.NCOR1.LS180_125 133 bp overlap

NCOR2 1 dataset

ChIP LS180 GSE39277.NCOR2.LS180 162 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 526 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 477 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 448 bp overlap

RAD21 5 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 524 bp overlap

ChIP HAP1 GSE126634.RAD21.HAP1 318 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 474 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 347 bp overlap

ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 201 bp overlap

RUNX2 1 dataset

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 435 bp overlap

RXR 1 dataset

ChIP LS180_125 GSE31939.RXR.LS180_125 201 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

SMARCA4 2 datasets

ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 243 bp overlap

ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 264 bp overlap

SMC1 2 datasets

ChIP HAP1 GSE94992.SMC1.HAP1 247 bp overlap

ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 501 bp overlap

SMC3 1 dataset

ChIP GP5D GSE51234.SMC3.GP5D 510 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 297 bp overlap

Six4 1 dataset

Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap

TBP 1 dataset

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 107 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

VDR 1 dataset

ChIP LS180_125 GSE31939.VDR.LS180_125 167 bp overlap

ZNF143 1 dataset

Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap

ZNF354A 1 dataset

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

ZNF496 1 dataset

ChIP HEK293T GSE78099.ZNF496.HEK293T 448 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

ZSCAN16 1 dataset

Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap