chr10 : 28,518,834 – 28,519,331
497 bp 47 TFs 4 linked genes
This 497 bp open chromatin element is linked to 4 target genes and is bound by 47 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
WAC-AS1 13.7 kb Distal Multiome
WAC 14.1 kb Distal Multiome
BAMBI 158.4 kb Distal Multiome
MPP7 216.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:28,513,834 – 28,524,331
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
Ahr::Arnt 7 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_72h DE_72h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 164 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 71 bp overlap
CEBPB 10 datasets
Motif DE_12h DE_12h-CEBPB_MA0466.4 10 bp overlap
Motif DE_24h DE_24h-CEBPB_MA0466.4 10 bp overlap
Motif DE_60h DE_60h-CEBPB_MA0466.4 10 bp overlap
Motif DE_72h DE_72h-CEBPB_MA0466.4 10 bp overlap
Motif ES_0h ES_0h-CEBPB_MA0466.4 10 bp overlap
ChIP H1 ENCFF871PTR 169 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 100 bp overlap
ChIP K562 ENCFF189VBN 216 bp overlap
ChIP K562 ENCFF584CTB 360 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 108 bp overlap
CEBPE 5 datasets
Motif DE_12h DE_12h-CEBPE_MA0837.3 10 bp overlap
Motif DE_24h DE_24h-CEBPE_MA0837.3 10 bp overlap
Motif DE_60h DE_60h-CEBPE_MA0837.3 10 bp overlap
Motif DE_72h DE_72h-CEBPE_MA0837.3 10 bp overlap
Motif ES_0h ES_0h-CEBPE_MA0837.3 10 bp overlap
CEBPG 5 datasets
Motif DE_12h DE_12h-CEBPG_MA0838.1 10 bp overlap
Motif DE_24h DE_24h-CEBPG_MA0838.1 10 bp overlap
Motif DE_60h DE_60h-CEBPG_MA0838.1 10 bp overlap
Motif DE_72h DE_72h-CEBPG_MA0838.1 10 bp overlap
Motif ES_0h ES_0h-CEBPG_MA0838.1 10 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 145 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 245 bp overlap
ChIP BLaER1 ENCFF093OYK 182 bp overlap
ChIP BLaER1 ENCFF364PUR 365 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_24h DE_24h-DPRX_MA1480.2 9 bp overlap
Dmbx1 1 dataset
Motif DE_24h DE_24h-Dmbx1_MA0883.2 10 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_24h DE_24h-ETV5FOXO1_MA1947.2 10 bp overlap
FEZF2 5 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXC2 1 dataset
Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap
FOXE1 1 dataset
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
GATA1 1 dataset
Motif DE_24h DE_24h-GATA1_MA0035.5 7 bp overlap
GFI1 5 datasets
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
Motif DE_24h DE_24h-GFI1_MA0038.3 11 bp overlap
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
Motif ES_0h ES_0h-GFI1_MA0038.3 11 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
Hmga1 1 dataset
Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap
MEF2A 1 dataset
Motif DE_24h DE_24h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_24h DE_24h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_24h DE_24h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_24h DE_24h-MEF2D_MA0773.1 12 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 232 bp overlap
Mecom 1 dataset
Motif DE_24h DE_24h-Mecom_MA0029.2 11 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
PITX1 2 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 378 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 401 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 494 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RXRB 5 datasets
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
Motif DE_24h DE_24h-RXRB_MA1555.1 14 bp overlap
Motif DE_60h DE_60h-RXRB_MA1555.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA1555.1 14 bp overlap
Motif ES_0h ES_0h-RXRB_MA1555.1 14 bp overlap
RXRG 5 datasets
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
Motif DE_24h DE_24h-RXRG_MA1556.1 14 bp overlap
Motif DE_60h DE_60h-RXRG_MA1556.1 14 bp overlap
Motif DE_72h DE_72h-RXRG_MA1556.1 14 bp overlap
Motif ES_0h ES_0h-RXRG_MA1556.1 14 bp overlap
SP5 8 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBF2 5 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
Motif DE_72h DE_72h-SREBF2_MA0596.1 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 166 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 497 bp overlap
ChIP K562 ENCFF875HLX 201 bp overlap
ZNF135 8 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF354A 1 dataset
Motif DE_24h DE_24h-ZNF354A_MA1978.2 20 bp overlap
ZNF460 8 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF675 3 datasets
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Motif DE_24h DE_24h-ZNF675_MA1714.2 19 bp overlap
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF677 1 dataset
Motif DE_24h DE_24h-ZNF677_MA2101.1 12 bp overlap
ZNF770 3 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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