chr1 : 181,448,515 181,448,922
407 bp 66 TFs 0 linked genes
This 407 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:181,443,515 – 181,453,922
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 102 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 280 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 74 bp overlap
BRD4 3 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 134 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 178 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 233 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 220 bp overlap
ChIP K562 ENCFF963TXY 339 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 320 bp overlap
ChIP K562 ENCFF673OEZ 260 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 186 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 338 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 137 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 119 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 121 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 276 bp overlap
CTNNB1 1 dataset
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 190 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 281 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 393 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 63 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 154 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 244 bp overlap
ERG 1 dataset
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 147 bp overlap
ESR1 3 datasets
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 154 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 237 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 139 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 305 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 261 bp overlap
ChIP K562 ENCFF455MKD 407 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 147 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 395 bp overlap
ChIP DE DE-FOXA2-2 384 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 146 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 175 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 215 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 220 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 188 bp overlap
ChIP K562 ENCFF544PCK 249 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 257 bp overlap
GATA3 2 datasets
ChIP CD4_TH2 GSE72266.GATA3.CD4_TH2 198 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 260 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 407 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 220 bp overlap
ChIP foregut GSE117136.GATA4.foregut 303 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 388 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 240 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 301 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 139 bp overlap
ChIP DE DE-GATA6-1 407 bp overlap
ChIP DE DE-GATA6-2 407 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 366 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 325 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 362 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 325 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 404 bp overlap
ChIP foregut GSE117136.GATA6.foregut 348 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 270 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 253 bp overlap
JUN 1 dataset
ChIP K-562 ENCSR000FAH.JUN.K-562 129 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 187 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 196 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 125 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 123 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 108 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 256 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 178 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 254 bp overlap
ChIP K562 ENCFF320GSD 191 bp overlap
MYB 2 datasets
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 176 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 226 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 98 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 287 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 177 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 312 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 249 bp overlap
ChIP K562 ENCFF236IUS 212 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 311 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 180 bp overlap
RUNX1 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 162 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 162 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 313 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 137 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 224 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 382 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 407 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 358 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 270 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 407 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 254 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 198 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 289 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 376 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 251 bp overlap
ChIP K562 ENCFF059YCJ 335 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
TAL1 10 datasets
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 172 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 254 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 231 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 156 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 151 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 227 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 202 bp overlap
ChIP K562 ENCFF620GMX 294 bp overlap
ChIP K562 ENCFF661CCK 263 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 228 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 110 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 225 bp overlap
ChIP K562 ENCFF931DJY 329 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 150 bp overlap
ChIP K562 ENCFF319QZT 334 bp overlap
TCF7 1 dataset
ChIP K-562 ENCSR863KUB.TCF7.K-562 151 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 312 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 348 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 51 bp overlap