chr9 : 105,241,769 105,241,932
163 bp 71 TFs 1 linked gene
This 163 bp open chromatin element is linked to SLC44A1 and is bound by 71 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC44A1 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:105,236,769 – 105,246,932
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Arid3b 1 dataset
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CEBPA 4 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 148 bp overlap
ChIP HepG2 ENCFF175DFS 151 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 159 bp overlap
CEBPB 11 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 139 bp overlap
Motif DE_12h DE_12h-CEBPB_MA0466.4 10 bp overlap
ChIP H1 ENCFF871PTR 73 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 163 bp overlap
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF074JWB 163 bp overlap
ChIP HepG2 ENCFF536NTI 163 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 140 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 116 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 111 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 163 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CEBPE 1 dataset
Motif DE_12h DE_12h-CEBPE_MA0837.3 10 bp overlap
CEBPG 3 datasets
Motif DE_12h DE_12h-CEBPG_MA0838.1 10 bp overlap
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
ChIP HepG2 ENCFF503XBC 119 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 163 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 163 bp overlap
DBP 1 dataset
Motif DE_12h DE_12h-DBP_MA0639.2 10 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 73 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 129 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 132 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 163 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 163 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HLF 3 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 163 bp overlap
ChIP HepG2 ENCFF854JLR 74 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 163 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFIL3 3 datasets
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
ChIP Hep-G2 GSE97661.NFIL3.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF686VLI 163 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 76 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 163 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 163 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 163 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 163 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 110 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 118 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 94 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 114 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 163 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 163 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 163 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 163 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 163 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 163 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap