chr9 : 27,715,690 – 27,716,083

393 bp 60 TFs 0 linked genes

This 393 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

Ar 1 dataset

Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap

BRD4 1 dataset

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

Bach1::Mafk 1 dataset

Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

EBF1 1 dataset

Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap

EBF3 1 dataset

Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap

EGR1 2 datasets

ChIP A-375 GSE116190.EGR1.A-375 279 bp overlap

Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap

EGR2 1 dataset

Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap

EGR4 1 dataset

Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap

Ebf2 1 dataset

Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 363 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 320 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 393 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-2 311 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 350 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 103 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 267 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 363 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 195 bp overlap

HAND2 3 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 227 bp overlap

ChIP Kelly GSE94822.HAND2.Kelly 123 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 352 bp overlap

Hnf1A 3 datasets

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap

IRF2 2 datasets

Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap

Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap

IRF7 2 datasets

Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap

Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap

Irf1 2 datasets

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 390 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 393 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 393 bp overlap

JUND 1 dataset

Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap

Lef1 2 datasets

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap

MAF::NFE2 1 dataset

Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

MED26 1 dataset

ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 208 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NR3C1 1 dataset

Motif DE_12h DE_12h-NR3C1_MA0113.4 15 bp overlap

Nfe2l2 1 dataset

Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap

Plagl1 2 datasets

Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap

Motif DE_60h DE_60h-Plagl1_MA1615.2 8 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 393 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 393 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 393 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 393 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 393 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 393 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 367 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 393 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 164 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 316 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Stat2 2 datasets

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

TCF7 2 datasets

Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap

Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap

TCF7L1 2 datasets

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 2 datasets

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap

TFAP2A 4 datasets

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap

Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap

TFAP2B 3 datasets

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap

Motif DE_60h DE_60h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 7 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap

Motif DE_60h DE_60h-TFAP2C_MA0524.3 11 bp overlap

Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 295 bp overlap

TFAP2E 1 dataset

Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap

THAP1 3 datasets

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap

TP53 1 dataset

ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 204 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF263 1 dataset

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF320 1 dataset

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF460 1 dataset

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

ZNF530 2 datasets

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap

ZNF750 1 dataset

ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 217 bp overlap

ZSCAN31 1 dataset

Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap