chr8 : 105,592,050 – 105,592,413

363 bp 66 TFs 0 linked genes

This 363 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BRD4 2 datasets

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 196 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 99 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CEBPB 1 dataset

ChIP K-562 ENCSR000BRQ.CEBPB.K-562 116 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 350 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

ETV2 1 dataset

Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

EZH2 1 dataset

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 207 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 124 bp overlap

GATA6 1 dataset

ChIP DE_D1 S09-DE-d1-GATA6-exp1 297 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HOXA5 1 dataset

Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap

HOXA6 1 dataset

Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

HOXB6 1 dataset

Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap

HOXD8 1 dataset

Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 165 bp overlap

IRF3 1 dataset

Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap

IRF7 1 dataset

Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LDB1 1 dataset

ChIP K-562 GSE142227.LDB1.K-562 85 bp overlap

LEF1 1 dataset

ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 206 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

MED1 1 dataset

ChIP SGBS GSE64233.MED1.SGBS 140 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MEIS3 1 dataset

Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCFF065NZG 255 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 188 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 363 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 288 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 363 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 363 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 349 bp overlap

ChIP hESC GSE18292.NANOG.hESC 206 bp overlap

ChIP hESC GSE20650.NANOG.hESC 154 bp overlap

NIPBL 2 datasets

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 206 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 205 bp overlap

NR1D1 1 dataset

Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap

NR2F2 3 datasets

ChIP liver ENCFF565JGD 352 bp overlap

ChIP liver ENCSR168SMX.NR2F2.liver 248 bp overlap

ChIP liver ENCSR338MMB.NR2F2.liver 205 bp overlap

Nfat5 1 dataset

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 321 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 226 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 164 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 281 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 363 bp overlap

ChIP HEK293 GSE76494.PRDM6.HEK293 191 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 52 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

RBM22 1 dataset

ChIP K-562 GSE120104.RBM22.K-562 290 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RELA 2 datasets

ChIP SGBS GSE64233.RELA.SGBS 108 bp overlap

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 54 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 363 bp overlap

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 249 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 363 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 286 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 363 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 253 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 213 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 284 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 217 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 234 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 137 bp overlap

ZNF384 1 dataset

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF770 1 dataset

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap