chr8 : 104,473,248 – 104,474,132
884 bp 70 TFs 1 linked gene
This 884 bp open chromatin element is linked to DPYS and is bound by 70 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DPYS 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:104,468,248 – 104,479,132
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ARNT2 2 datasets
Motif DE_60h DE_60h-ARNT2_MA1464.2 8 bp overlap
Motif DE_72h DE_72h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 2 datasets
Motif DE_60h DE_60h-Arnt_MA0004.1 6 bp overlap
Motif DE_72h DE_72h-Arnt_MA0004.1 6 bp overlap
Arntl 2 datasets
Motif DE_60h DE_60h-Arntl_MA0603.2 8 bp overlap
Motif DE_72h DE_72h-Arntl_MA0603.2 8 bp overlap
BHLHE40 2 datasets
Motif DE_60h DE_60h-BHLHE40_MA0464.3 8 bp overlap
Motif DE_72h DE_72h-BHLHE40_MA0464.3 8 bp overlap
BHLHE41 2 datasets
Motif DE_60h DE_60h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_72h DE_72h-BHLHE41_MA0636.1 10 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 286 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 251 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 4 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
ChIP hESC GSE26097.EOMES.hESC 143 bp overlap
ERF::FIGLA 2 datasets
Motif DE_60h DE_60h-ERFFIGLA_MA1934.2 13 bp overlap
Motif DE_72h DE_72h-ERFFIGLA_MA1934.2 13 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_60h DE_60h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_72h DE_72h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 2 datasets
Motif DE_60h DE_60h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_72h DE_72h-ETV5FIGLA_MA1945.2 14 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 196 bp overlap
ChIP DE DE-FOXA2-1 884 bp overlap
ChIP DE DE-FOXA2-2 856 bp overlap
Foxl2 2 datasets
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 145 bp overlap
GATA2 3 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 158 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 176 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 876 bp overlap
ChIP DE DE-GATA4-2 884 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 599 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 860 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 859 bp overlap
ChIP DE DE-GATA6-2 884 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 708 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 788 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 645 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 884 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 830 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 787 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 818 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 421 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 279 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HES6 2 datasets
Motif DE_60h DE_60h-HES6_MA1493.1 10 bp overlap
Motif DE_72h DE_72h-HES6_MA1493.1 10 bp overlap
HIF1A 2 datasets
Motif DE_60h DE_60h-HIF1A_MA1106.2 6 bp overlap
Motif DE_72h DE_72h-HIF1A_MA1106.2 6 bp overlap
LIN54 2 datasets
Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap
Motif DE_72h DE_72h-LIN54_MA0619.2 7 bp overlap
MAX 2 datasets
Motif DE_60h DE_60h-MAX_MA0058.4 6 bp overlap
Motif DE_72h DE_72h-MAX_MA0058.4 6 bp overlap
MED1 1 dataset
ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 159 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MITF 2 datasets
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 286 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 232 bp overlap
MLX 2 datasets
Motif DE_60h DE_60h-MLX_MA0663.1 10 bp overlap
Motif DE_72h DE_72h-MLX_MA0663.1 10 bp overlap
MLXIPL 2 datasets
Motif DE_60h DE_60h-MLXIPL_MA0664.2 8 bp overlap
Motif DE_72h DE_72h-MLXIPL_MA0664.2 8 bp overlap
MNT 2 datasets
Motif DE_60h DE_60h-MNT_MA0825.2 6 bp overlap
Motif DE_72h DE_72h-MNT_MA0825.2 6 bp overlap
MYOD1 2 datasets
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 226 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 183 bp overlap
Mlxip 2 datasets
Motif DE_60h DE_60h-Mlxip_MA0622.2 6 bp overlap
Motif DE_72h DE_72h-Mlxip_MA0622.2 6 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 230 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
PHOX2A 2 datasets
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_72h DE_72h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm5 2 datasets
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SATB1 1 dataset
ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 292 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 865 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 422 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 297 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 828 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 223 bp overlap
SOHLH2 2 datasets
Motif DE_60h DE_60h-SOHLH2_MA1560.2 8 bp overlap
Motif DE_72h DE_72h-SOHLH2_MA1560.2 8 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 236 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 301 bp overlap
SRF 1 dataset
Motif DE_72h DE_72h-SRF_MA0083.3 16 bp overlap
TCF3 2 datasets
Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCFL5 2 datasets
Motif DE_60h DE_60h-TCFL5_MA0632.3 8 bp overlap
Motif DE_72h DE_72h-TCFL5_MA0632.3 8 bp overlap
TEAD1 2 datasets
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD4 2 datasets
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_72h DE_72h-TFAP4ETV1_MA1966.2 13 bp overlap
TFEB 2 datasets
Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap
Motif DE_72h DE_72h-TFEB_MA0692.2 8 bp overlap
TFEC 2 datasets
Motif DE_60h DE_60h-TFEC_MA0871.3 8 bp overlap
Motif DE_72h DE_72h-TFEC_MA0871.3 8 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIM3 1 dataset
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF35 1 dataset
Motif DE_60h DE_60h-ZNF35_MA2333.1 7 bp overlap
ZNF384 2 datasets
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
Motif DE_72h DE_72h-ZNF384_MA1125.2 8 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 190 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 225 bp overlap
ZNF692 1 dataset
Motif DE_72h DE_72h-ZNF692_MA1986.2 8 bp overlap
ZNF766 1 dataset
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
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