chr1 : 16,639,254 16,639,764
510 bp 46 TFs 11 linked genes
This 510 bp open chromatin element is linked to 11 target genes and is bound by 46 transcription factors.
Linked Genes
11 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ENSG00000283773 3.3 kb Proximal Proximity
ENSG00000291072 4.9 kb Proximal Proximity
MST1P2 5.9 kb Proximal Proximity
NBPF1 26.0 kb Distal Multiome
ENSG00000290851 119.8 kb Distal Multiome
CROCCP3 140.2 kb Distal Multiome
NECAP2 198.8 kb Distal Multiome
ENSG00000238142 250.1 kb Distal Multiome
SZRD1 272.3 kb Distal Multiome
CROCC 282.4 kb Distal Multiome
FBXO42 287.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:16,634,254 – 16,644,764
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AGO2 1 dataset
ChIP HepG2 ENCFF252VFI 115 bp overlap
ARHGAP35 1 dataset
ChIP HepG2 ENCFF778RZN 396 bp overlap
ARID3B 1 dataset
ChIP K562 ENCFF224SWC 273 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF651CMK 382 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 441 bp overlap
CTCF 8 datasets
ChIP WERI-Rb-1 ENCFF349QKF 138 bp overlap
ChIP endodermal cell ENCFF471YCZ 211 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 304 bp overlap
ChIP gastrocnemius medialis ENCFF291LAG 368 bp overlap
ChIP gastrocnemius medialis ENCFF410RHW 339 bp overlap
ChIP gastrocnemius medialis ENCFF410RHW 447 bp overlap
ChIP gastrocnemius medialis ENCFF468QWC 278 bp overlap
ChIP psoas muscle ENCFF305ZVF 318 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 504 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 299 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 289 bp overlap
ChIP DE DE-FOXA2-2 265 bp overlap
FOXP1 1 dataset
ChIP K562 ENCFF954SDY 97 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 422 bp overlap
ChIP DE DE-GATA4-2 441 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 491 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 479 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 432 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 449 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 461 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 272 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 396 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 366 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 510 bp overlap
HIVEP1 1 dataset
ChIP HepG2 ENCFF063BCC 439 bp overlap
MAX 3 datasets
ChIP K562 ENCFF524IJO 304 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 288 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 273 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 510 bp overlap
MXD1 1 dataset
ChIP HepG2 ENCFF717MYN 441 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 283 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 179 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF385PDC 149 bp overlap
POLR2A 1 dataset
ChIP HepG2 ENCFF350RIU 110 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF508UTS 510 bp overlap
RBBP5 1 dataset
ChIP K562 ENCFF070CVK 431 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF967GRF 156 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 159 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 463 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 459 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 243 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 510 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 429 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 510 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 443 bp overlap
SMAD3 1 dataset
ChIP K562 ENCFF035HNX 361 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 175 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 130 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 241 bp overlap
SPI1 1 dataset
ChIP K562 ENCFF410ORC 205 bp overlap
STAT6 1 dataset
ChIP K562 ENCFF444HZW 162 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF254RJL 294 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 510 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP K562 ENCFF202SFC 284 bp overlap
ChIP K562 ENCFF202SFC 410 bp overlap
ZBTB26 1 dataset
ChIP HepG2 ENCFF492SAJ 421 bp overlap
ZBTB33 2 datasets
ChIP K562 ENCFF427SDV 361 bp overlap
ChIP K562 ENCFF427SDV 370 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 241 bp overlap
ZNF354B 1 dataset
ChIP K562 ENCFF955JQT 102 bp overlap
ZNF511 1 dataset
ChIP K562 ENCFF962ZYT 396 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 455 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 444 bp overlap
ZNF84 1 dataset
ChIP K562 ENCFF365MNT 285 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 446 bp overlap