chr8 : 35,561,004 – 35,561,448

444 bp 66 TFs 0 linked genes

This 444 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

BRD2 2 datasets

ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 320 bp overlap

ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 403 bp overlap

BRD3 1 dataset

ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 146 bp overlap

BRD4 1 dataset

ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 196 bp overlap

CEBPA 5 datasets

ChIP MV4-11 GSE88746.CEBPA.MV4-11 410 bp overlap

ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 72 bp overlap

ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 52 bp overlap

ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 72 bp overlap

ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 55 bp overlap

CEBPB 1 dataset

ChIP MV4-11 GSE88746.CEBPB.MV4-11 239 bp overlap

CHD4 1 dataset

ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 297 bp overlap

CTCF 2 datasets

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 135 bp overlap

ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 299 bp overlap

Cebpa 5 datasets

ChIP BLaER1 ENCFF031ISE 166 bp overlap

ChIP BLaER1 ENCFF093OYK 368 bp overlap

ChIP BLaER1 ENCFF364PUR 130 bp overlap

ChIP BLaER1 ENCFF844FIP 74 bp overlap

ChIP BLaER1 ENCFF858JKM 86 bp overlap

ESR1 1 dataset

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 444 bp overlap

ESR2 1 dataset

Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap

GATA2 1 dataset

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap

Gli1 1 dataset

Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap

Hmga1 1 dataset

Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap

Hnf1A 2 datasets

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

IKZF1 1 dataset

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 444 bp overlap

IKZF3 1 dataset

ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 318 bp overlap

IRF4 1 dataset

ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap

KLF1 1 dataset

Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap

KLF10 1 dataset

Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap

KLF11 1 dataset

Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap

KLF16 1 dataset

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

KLF2 1 dataset

Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap

KLF3 1 dataset

Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap

KLF4 2 datasets

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

KLF6 1 dataset

Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap

KLF9 1 dataset

Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap

KMT2A 2 datasets

ChIP MV4-11 GSE79899.KMT2A.MV4-11 203 bp overlap

ChIP THP-1 GSE79899.KMT2A.THP-1 248 bp overlap

Lef1 1 dataset

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

MTA2 1 dataset

ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 272 bp overlap

MYB 1 dataset

ChIP THP-1 GSE90769.MYB.THP-1 122 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 444 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 273 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 444 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 339 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 291 bp overlap

ChIP hESC GSE20650.NANOG.hESC 199 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 260 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2AF1 1 dataset

ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 290 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 11 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 276 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 444 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 380 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 181 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 190 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 188 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 444 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 444 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 229 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 258 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

REST 1 dataset

ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 66 bp overlap

RUNX1 2 datasets

ChIP 697 GSE138031.RUNX1.697 351 bp overlap

ChIP MV4-11 GSE79899.RUNX1.MV4-11 125 bp overlap

SIN3A 1 dataset

ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 103 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 3 datasets

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 291 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 138 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 319 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SP1 2 datasets

ChIP liver ENCFF597LFJ 55 bp overlap

ChIP liver ENCFF769YSM 61 bp overlap

SP3 1 dataset

Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap

SPI1 1 dataset

ChIP NCI-H929 GSE56857.SPI1.NCI-H929 118 bp overlap

Sox17 1 dataset

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 235 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 171 bp overlap

ZBTB26 1 dataset

Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF320 1 dataset

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap