chr1 : 163,537,494 163,538,265
771 bp 49 TFs 0 linked genes
This 771 bp open chromatin element has no linked target genes and is bound by 49 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:163,532,494 – 163,543,265
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 16 datasets
ChIP LNCaP ERP001226.AR.LNCaP 127 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 249 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 235 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 133 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 241 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 240 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 135 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 262 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 296 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 305 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 211 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 401 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 406 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 248 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 280 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 84 bp overlap
ARID1A 2 datasets
ChIP LNCaP GSE94682.ARID1A.LNCaP 244 bp overlap
ChIP LNCaP_r1881 GSE94682.ARID1A.LNCaP_r1881 286 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 204 bp overlap
BRD4 1 dataset
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 370 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 174 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 324 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 433 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 415 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 273 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 498 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 545 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 419 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 437 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 539 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 402 bp overlap
ChIP BLaER1 ENCFF858JKM 432 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 282 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 180 bp overlap
ETV1 1 dataset
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 206 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 280 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 198 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 445 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 370 bp overlap
FOXA1 13 datasets
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 186 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 311 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 279 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 318 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 352 bp overlap
ChIP LNCaP_FA GSE114737.FOXA1.LNCaP_FA 224 bp overlap
ChIP LNCaP_GSK-48H GSE114266.FOXA1.LNCaP_GSK-48H 299 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 252 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 183 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 173 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 283 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 351 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 233 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 699 bp overlap
ChIP DE DE-FOXA2-2 755 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 104 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 553 bp overlap
ChIP DE DE-GATA4-2 771 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 241 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 617 bp overlap
ChIP DE DE-GATA6-2 771 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 705 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 698 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 770 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 597 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 771 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 748 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 538 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 383 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-N 167 bp overlap
HOXB13 2 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 425 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 165 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 461 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 386 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 576 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 596 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 452 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 481 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 383 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 314 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 251 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 373 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 491 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 363 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 331 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 502 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 239 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 460 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 432 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 447 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 376 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 366 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 402 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 491 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 325 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 319 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 429 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 324 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 220 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 170 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 519 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 595 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 495 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 386 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 403 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 456 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 636 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 391 bp overlap
SMARCA4 3 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 208 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 135 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 339 bp overlap
SMARCC1 2 datasets
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 262 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 198 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 272 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 346 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 358 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 478 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 172 bp overlap
ChIP HepG2 ENCFF490FFQ 371 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 385 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 223 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 250 bp overlap