chr6 : 111,254,496 111,254,699
203 bp 38 TFs 2 linked genes
This 203 bp open chromatin element is linked to MFSD4B-DT and MFSD4B and is bound by 38 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MFSD4B-DT 4.3 kb Proximal Proximity
MFSD4B 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:111,249,496 – 111,259,699
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 203 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 165 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 203 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 140 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 203 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 187 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 175 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 99 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 203 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 203 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 203 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 203 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 202 bp overlap
ChIP hESC GSE17917.EP300.hESC 203 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 143 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 203 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 178 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 195 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 170 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 111 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 203 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 165 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 203 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 203 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 203 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 203 bp overlap
ChIP H1 ENCFF747ZPQ 188 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 203 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 203 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 203 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 203 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 203 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 203 bp overlap
ChIP hESC GSE20650.NANOG.hESC 203 bp overlap
ChIP hESC GSE18292.NANOG.hESC 203 bp overlap
NIPBL 2 datasets
ChIP WA09 GSE105028.NIPBL.WA09 190 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 166 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 203 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 170 bp overlap
POU5F1 14 datasets
ChIP GM23338 ENCFF333SNB 82 bp overlap
ChIP H1 ENCFF698ZAP 197 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 203 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 203 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 203 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 203 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 203 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 203 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 203 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 199 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 203 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 203 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 203 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 203 bp overlap
PRDM14 2 datasets
ChIP hESC GSE138674.PRDM14.hESC 193 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 195 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 137 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 203 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 203 bp overlap
ChIP H1 ENCFF896IJG 203 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 147 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 150 bp overlap
SMARCA4 5 datasets
ChIP NSC GSE125033.SMARCA4.NSC 91 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 203 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 203 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 203 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 203 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 191 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 194 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 203 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 203 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 203 bp overlap
ChIP hESC GSE69479.SOX2.hESC 203 bp overlap
ChIP hESC GSE18292.SOX2.hESC 152 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 203 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 203 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 199 bp overlap
Spi1 1 dataset
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TBP 1 dataset
ChIP H1 ENCFF859IIO 146 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 129 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 203 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 203 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 203 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 199 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 203 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 166 bp overlap