chr6 : 110,173,972 110,174,206
234 bp 36 TFs 2 linked genes
This 234 bp open chromatin element is linked to WASF1 and CDC40 and is bound by 36 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
WASF1 5.5 kb Proximal Proximity
CDC40 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:110,168,972 – 110,179,206
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 181 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 197 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 234 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 59 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 196 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 79 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 234 bp overlap
ChIP DE DE-FOXA2-2 234 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 155 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 177 bp overlap
ChIP SK-N-SH ENCFF764OZD 121 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 69 bp overlap
GATA3 4 datasets
ChIP Kelly GSE65664.GATA3.Kelly 84 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 124 bp overlap
ChIP SH-SY5Y ENCFF475HYF 206 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 188 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 234 bp overlap
ChIP DE DE-GATA4-2 234 bp overlap
ChIP HepG2 ENCFF309FOQ 94 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 157 bp overlap
ChIP DE DE-GATA6-2 234 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 202 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 148 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 187 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 158 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 64 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 170 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 213 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 234 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 224 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 234 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 211 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 116 bp overlap
ChIP HepG2 ENCFF554DMZ 234 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 64 bp overlap
REST 1 dataset
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 127 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 141 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 234 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 96 bp overlap
SPI1 2 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 126 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 147 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 59 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 211 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 188 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 188 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 87 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 144 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 107 bp overlap
ZNF555 1 dataset
ChIP HEK293T GSE78099.ZNF555.HEK293T 220 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 195 bp overlap
ZNF777 1 dataset
ChIP HepG2 ENCFF362XDA 225 bp overlap