chr6 : 109,459,229 109,459,417
188 bp 46 TFs 1 linked gene
This 188 bp open chromatin element is linked to MICAL1 and is bound by 46 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MICAL1 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:109,454,229 – 109,464,417
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 84 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 188 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 113 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 60 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 172 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 64 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 82 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 182 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 85 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 74 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 188 bp overlap
ChIP DE DE-FOXA2-2 188 bp overlap
FOXP1 1 dataset
ChIP B-cell_IgD-pos GSE114803.FOXP1.B-cell_IgD-pos 150 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 188 bp overlap
ChIP DE DE-GATA4-2 188 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 188 bp overlap
ChIP DE DE-GATA6-2 188 bp overlap
GFI1 1 dataset
ChIP NB4 GSE128528.GFI1.NB4 160 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 84 bp overlap
INTS13 1 dataset
ChIP HL-60 GSE106359.INTS13.HL-60 113 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 152 bp overlap
KDM1A 6 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 94 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 123 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 132 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 166 bp overlap
ChIP SKNO-1_DMSO GSE71739.KDM1A.SKNO-1_DMSO 188 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 82 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 134 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 160 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 57 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 50 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 57 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 113 bp overlap
NFATC2 2 datasets
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 148 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 116 bp overlap
POLR2A 3 datasets
ChIP GM12878 ENCFF899QYP 188 bp overlap
ChIP GM12892 ENCFF245LYF 178 bp overlap
ChIP HL-60 ENCFF321XKE 61 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 55 bp overlap
RCOR1 1 dataset
ChIP GM12878 ENCFF982CRX 181 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 188 bp overlap
RUNX1 1 dataset
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 70 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 188 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 188 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 123 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 87 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 60 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 76 bp overlap
SMARCA5 1 dataset
ChIP GM12878 ENCFF327LDR 188 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 54 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 188 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 188 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 134 bp overlap
SPI1 6 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 101 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 67 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 105 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 78 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 57 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 53 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 66 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 90 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 107 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 176 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 54 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 157 bp overlap
USF1 2 datasets
ChIP GM12878 ENCFF880HJL 188 bp overlap
ChIP K562 ENCFF633EZB 52 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 188 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 58 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 188 bp overlap