chr6 : 82,630,207 – 82,630,681
474 bp 95 TFs 0 linked genes
This 474 bp open chromatin element has no linked target genes and is bound by 95 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:82,625,207 – 82,635,681
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
Motif DE_72h DE_72h-ALX3_MA0634.2 6 bp overlap
ARGFX 2 datasets
Motif DE_60h DE_60h-ARGFX_MA1463.2 8 bp overlap
Motif DE_72h DE_72h-ARGFX_MA1463.2 8 bp overlap
Alx1 2 datasets
Motif DE_60h DE_60h-Alx1_MA0854.2 8 bp overlap
Motif DE_72h DE_72h-Alx1_MA0854.2 8 bp overlap
Alx4 2 datasets
Motif DE_60h DE_60h-Alx4_MA0853.2 12 bp overlap
Motif DE_72h DE_72h-Alx4_MA0853.2 12 bp overlap
Arid3b 2 datasets
Motif DE_60h DE_60h-Arid3b_MA0601.2 7 bp overlap
Motif DE_72h DE_72h-Arid3b_MA0601.2 7 bp overlap
Arx 2 datasets
Motif DE_60h DE_60h-Arx_MA0874.2 10 bp overlap
Motif DE_72h DE_72h-Arx_MA0874.2 10 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 171 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 326 bp overlap
Crx 2 datasets
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DRGX 2 datasets
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
Motif DE_72h DE_72h-DRGX_MA1481.2 6 bp overlap
DUX4 3 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dmbx1 1 dataset
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
EMX1 2 datasets
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
Motif DE_72h DE_72h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
Motif DE_72h DE_72h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
Motif DE_72h DE_72h-EN1_MA0027.3 6 bp overlap
EN2 2 datasets
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
Motif DE_72h DE_72h-EN2_MA0642.3 7 bp overlap
ESX1 2 datasets
Motif DE_60h DE_60h-ESX1_MA0644.3 7 bp overlap
Motif DE_72h DE_72h-ESX1_MA0644.3 7 bp overlap
EVX1 2 datasets
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
Motif DE_72h DE_72h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
Motif DE_72h DE_72h-EVX2_MA0888.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 419 bp overlap
ChIP DE DE-FOXA2-2 443 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 474 bp overlap
ChIP DE DE-GATA4-2 474 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 474 bp overlap
ChIP DE DE-GATA6-2 474 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 300 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 376 bp overlap
GBX1 2 datasets
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
Motif DE_72h DE_72h-GBX1_MA0889.2 7 bp overlap
GSC 2 datasets
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
GSX1 2 datasets
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
Motif DE_72h DE_72h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_60h DE_60h-GSX2_MA0893.3 7 bp overlap
Motif DE_72h DE_72h-GSX2_MA0893.3 7 bp overlap
Gfi1B 1 dataset
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HNF1A 2 datasets
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
Motif DE_72h DE_72h-HNF1B_MA0153.2 13 bp overlap
HOXA1 2 datasets
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
Motif DE_72h DE_72h-HOXA1_MA1495.2 6 bp overlap
HOXA2 2 datasets
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
Motif DE_72h DE_72h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
Motif DE_72h DE_72h-HOXA3_MA2119.1 7 bp overlap
HOXB1 2 datasets
Motif DE_60h DE_60h-HOXB1_MA2093.1 7 bp overlap
Motif DE_72h DE_72h-HOXB1_MA2093.1 7 bp overlap
HOXB2 2 datasets
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
Motif DE_72h DE_72h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
Motif DE_72h DE_72h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
Motif DE_72h DE_72h-HOXB5_MA0904.3 6 bp overlap
HOXC8 2 datasets
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
Motif DE_72h DE_72h-HOXC8_MA1505.2 6 bp overlap
HOXD3 2 datasets
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
Motif DE_72h DE_72h-HOXD3_MA0912.2 8 bp overlap
ISX 2 datasets
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
Motif DE_72h DE_72h-ISX_MA0654.2 6 bp overlap
LBX1 2 datasets
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
Motif DE_72h DE_72h-LBX1_MA0618.2 7 bp overlap
LHX5 2 datasets
Motif DE_60h DE_60h-LHX5_MA1519.2 7 bp overlap
Motif DE_72h DE_72h-LHX5_MA1519.2 7 bp overlap
LHX6 2 datasets
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
LHX9 2 datasets
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
Motif DE_72h DE_72h-LHX9_MA0701.3 7 bp overlap
LMX1A 2 datasets
Motif DE_60h DE_60h-LMX1A_MA0702.3 7 bp overlap
Motif DE_72h DE_72h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_60h DE_60h-LMX1B_MA0703.3 8 bp overlap
Motif DE_72h DE_72h-LMX1B_MA0703.3 8 bp overlap
Lhx3 2 datasets
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
Motif DE_72h DE_72h-Lhx3_MA0135.2 12 bp overlap
Lhx4 2 datasets
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Motif DE_72h DE_72h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
Motif DE_72h DE_72h-Lhx8_MA0705.2 6 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEOX1 2 datasets
Motif DE_60h DE_60h-MEOX1_MA0661.2 7 bp overlap
Motif DE_72h DE_72h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_60h DE_60h-MEOX2_MA0706.2 7 bp overlap
Motif DE_72h DE_72h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
Motif DE_72h DE_72h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
Motif DE_72h DE_72h-MNX1_MA0707.3 6 bp overlap
MZF1 1 dataset
Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NFATC3 2 datasets
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
NKX6-1 2 datasets
Motif DE_60h DE_60h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_72h DE_72h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 2 datasets
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
Motif DE_72h DE_72h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_60h DE_60h-NOTO_MA0710.2 7 bp overlap
Motif DE_72h DE_72h-NOTO_MA0710.2 7 bp overlap
Nfatc1 2 datasets
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
OTX1 2 datasets
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 3 datasets
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 315 bp overlap
PAX3 2 datasets
Motif DE_60h DE_60h-PAX3_MA0780.1 10 bp overlap
Motif DE_72h DE_72h-PAX3_MA0780.1 10 bp overlap
PAX4 2 datasets
Motif DE_60h DE_60h-PAX4_MA0068.2 8 bp overlap
Motif DE_72h DE_72h-PAX4_MA0068.2 8 bp overlap
PDX1 2 datasets
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
Motif DE_72h DE_72h-PDX1_MA0132.3 6 bp overlap
PHOX2B 2 datasets
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PITX1 2 datasets
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POU4F1 2 datasets
Motif DE_60h DE_60h-POU4F1_MA0790.2 12 bp overlap
Motif DE_72h DE_72h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
POU4F3 2 datasets
Motif DE_60h DE_60h-POU4F3_MA0791.2 12 bp overlap
Motif DE_72h DE_72h-POU4F3_MA0791.2 12 bp overlap
POU6F1 2 datasets
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
Motif DE_72h DE_72h-POU6F1_MA0628.2 6 bp overlap
POU6F2 2 datasets
Motif DE_60h DE_60h-POU6F2_MA0793.2 9 bp overlap
Motif DE_72h DE_72h-POU6F2_MA0793.2 9 bp overlap
PROP1 2 datasets
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
PRRX1 2 datasets
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
Motif DE_72h DE_72h-PRRX1_MA0716.2 6 bp overlap
PRRX2 2 datasets
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
Motif DE_72h DE_72h-PRRX2_MA0075.4 7 bp overlap
Pax7 2 datasets
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
RAX2 2 datasets
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
Motif DE_72h DE_72h-RAX2_MA0717.2 6 bp overlap
RHOXF1 2 datasets
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SHOX 2 datasets
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
Motif DE_72h DE_72h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 313 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 256 bp overlap
Shox2 2 datasets
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
Motif DE_72h DE_72h-Shox2_MA0720.2 6 bp overlap
TLX2 2 datasets
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
Motif DE_72h DE_72h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
Motif DE_72h DE_72h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_60h DE_60h-VAX1_MA0722.2 7 bp overlap
Motif DE_72h DE_72h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
Motif DE_72h DE_72h-VAX2_MA0723.3 6 bp overlap
VSX1 2 datasets
Motif DE_60h DE_60h-VSX1_MA0725.2 7 bp overlap
Motif DE_72h DE_72h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_60h DE_60h-VSX2_MA0726.2 7 bp overlap
Motif DE_72h DE_72h-VSX2_MA0726.2 7 bp overlap
ZNF184 2 datasets
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
Motif DE_72h DE_72h-ZNF184_MA2120.1 13 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 185 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 123 bp overlap
ZNF85 1 dataset
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
mix-a 2 datasets
Motif DE_60h DE_60h-mix-a_MA0621.2 7 bp overlap
Motif DE_72h DE_72h-mix-a_MA0621.2 7 bp overlap
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