chr6 : 10,420,583 – 10,420,904
321 bp 41 TFs 3 linked genes
This 321 bp open chromatin element is linked to ENSG00000228478, ENSG00000285759, and TFAP2A and is bound by 41 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000228478 5.3 kb Proximal Proximity
ENSG00000285759 5.7 kb Proximal Proximity
TFAP2A 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:10,415,583 – 10,425,904
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 149 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 149 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 150 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 76 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 321 bp overlap
BRD4 3 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 230 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 194 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 197 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 55 bp overlap
CREBBP_M742 1 dataset
ChIP NCI-H3396_E2 GSE32349.CREBBP_M742.NCI-H3396_E2 129 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 321 bp overlap
CTCF 4 datasets
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 75 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 69 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 166 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 58 bp overlap
ESR1 37 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 255 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 208 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 149 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 204 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 274 bp overlap
ChIP MCF-7_E2 GSE108883.ESR1.MCF-7_E2 211 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 315 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 210 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 201 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 264 bp overlap
ChIP MCF-7_Fulv GSE117941.ESR1.MCF-7_Fulv 245 bp overlap
ChIP MCF-7_GDC-0927 GSE117941.ESR1.MCF-7_GDC-0927 178 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 177 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 321 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 257 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 262 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 241 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 321 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 227 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 185 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 299 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 223 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 233 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 253 bp overlap
ChIP T-47D GSE74033.ESR1.T-47D 247 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 280 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 169 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 296 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 231 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 321 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 321 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 321 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 301 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 206 bp overlap
ChIP breast_tumor_Male_15 GSE104399.ESR1.breast_tumor_Male_15 65 bp overlap
ChIP breast_tumor_Male_15 GSE104399.ESR1.breast_tumor_Male_15 113 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 321 bp overlap
ESR1_Y537N 1 dataset
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 143 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 321 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 321 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 265 bp overlap
EZH2 13 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 313 bp overlap
ChIP GM23248 ENCFF404ZHM 69 bp overlap
ChIP GM23338 ENCFF613YON 170 bp overlap
ChIP GM23338 ENCFF613YON 187 bp overlap
ChIP GM23338 ENCFF886DXX 92 bp overlap
ChIP H1 ENCFF232NZA 321 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 286 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 301 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 282 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 321 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 269 bp overlap
ChIP neural progenitor cell ENCFF018MKA 321 bp overlap
ChIP neural progenitor cell ENCFF472NFV 321 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE51274.GATA3.MCF-7 63 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 118 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 63 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 59 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 168 bp overlap
GRHL2 3 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 321 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 265 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 181 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 321 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 158 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 321 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 311 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 109 bp overlap
KDM5B 3 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 102 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 86 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 116 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 180 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 169 bp overlap
PGR 7 datasets
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 160 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 272 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 218 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 156 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 214 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 219 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 171 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 224 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 321 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 321 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 270 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 321 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 321 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 321 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 236 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 262 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 321 bp overlap
ChIP HeLa-S3 ENCFF971JGA 206 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 168 bp overlap
STAT3 1 dataset
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 203 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 321 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 210 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 117 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 218 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 235 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 321 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 251 bp overlap
ZNF711 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZNF711.HEK293T_22Rv1 229 bp overlap
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