chr5 : 162,282,102 – 162,283,394

1,292 bp 112 TFs 0 linked genes

This 1.3 kb open chromatin element has no linked target genes and is bound by 112 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

112 transcription factors

ALX3 1 dataset

Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap

ARGFX 1 dataset

Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap

Alx1 1 dataset

Motif DE_36h DE_36h-Alx1_MA0854.2 8 bp overlap

Alx4 1 dataset

Motif DE_36h DE_36h-Alx4_MA0853.2 12 bp overlap

Arx 1 dataset

Motif DE_36h DE_36h-Arx_MA0874.2 10 bp overlap

Bcl11B 1 dataset

Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap

CEBPA 1 dataset

ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 78 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 321 bp overlap

DRGX 1 dataset

Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap

EBF3 1 dataset

Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap

EMX1 1 dataset

Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap

EMX2 1 dataset

Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap

EN1 1 dataset

Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap

EN2 1 dataset

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 328 bp overlap

ESR1 2 datasets

ChIP MCF-7_ethanol_MKL1D200 GSE107476.ESR1.MCF-7_ethanol_MKL1D200 254 bp overlap

ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 233 bp overlap

ESX1 1 dataset

Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap

EVX1 1 dataset

Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap

EVX2 1 dataset

Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 590 bp overlap

Ebf2 1 dataset

Motif DE_36h DE_36h-Ebf2_MA1604.2 9 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 329 bp overlap

GATA1::TAL1 2 datasets

Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 7 datasets

ChIP DE DE-GATA4-1 597 bp overlap

ChIP DE DE-GATA4-2 649 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 410 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 376 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 225 bp overlap

GATA5 2 datasets

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 14 datasets

ChIP DE DE-GATA6-1 515 bp overlap

ChIP DE DE-GATA6-2 638 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 765 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 766 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 853 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 796 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 779 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 853 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 615 bp overlap

ChIP foregut GSE117136.GATA6.foregut 354 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 363 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 295 bp overlap

GBX1 1 dataset

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GSX1 1 dataset

Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap

GSX2 1 dataset

Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap

Gata3 2 datasets

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

HOXA1 1 dataset

Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap

HOXA2 1 dataset

Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap

HOXA3 1 dataset

Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap

HOXB1 1 dataset

Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap

HOXB2 1 dataset

Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap

HOXB3 1 dataset

Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap

HOXB5 1 dataset

Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap

HOXC8 1 dataset

Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap

HOXD3 1 dataset

Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap

ISX 1 dataset

Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap

LBX1 1 dataset

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LHX5 1 dataset

Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap

LHX6 1 dataset

Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap

LHX9 1 dataset

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

LMX1A 1 dataset

Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap

LMX1B 1 dataset

Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap

Lhx1 1 dataset

Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap

Lhx4 1 dataset

Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap

Lhx8 1 dataset

Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap

MEOX1 1 dataset

Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap

MEOX2 1 dataset

Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap

MGA 1 dataset

Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap

MIXL1 1 dataset

Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap

MNX1 1 dataset

Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap

NFIA 2 datasets

Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap

Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap

NFIX 2 datasets

Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap

Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap

NKX6-1 1 dataset

Motif DE_36h DE_36h-NKX6-1_MA0674.2 7 bp overlap

NKX6-2 1 dataset

Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap

NOTO 1 dataset

Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap

Nr2e3 1 dataset

Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap

PAX4 1 dataset

Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap

PDX1 1 dataset

Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap

POU1F1 2 datasets

Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap

Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap

Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap

POU2F2 2 datasets

Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap

Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap

Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap

POU3F1 2 datasets

Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap

Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap

POU3F3 2 datasets

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

POU5F1 2 datasets

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap

POU5F1B 2 datasets

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap

POU6F1 1 dataset

Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap

POU6F2 1 dataset

Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap

PRDM1 1 dataset

Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap

PRRX1 1 dataset

Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap

PRRX2 1 dataset

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

Prdm5 2 datasets

Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap

Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap

RAX2 1 dataset

Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap

SHOX 1 dataset

Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 558 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 685 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 526 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 432 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 599 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 414 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 499 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 552 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 389 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 209 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 312 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 143 bp overlap

SREBF1 1 dataset

Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap

STAT1 1 dataset

Motif DE_36h DE_36h-STAT1_MA0137.4 9 bp overlap

STAT3 2 datasets

Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 262 bp overlap

Shox2 1 dataset

Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap

Sox17 1 dataset

Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap

Sox7 1 dataset

Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap

Stat4 1 dataset

Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_36h DE_36h-Stat5a_MA1624.2 9 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_36h DE_36h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 1 dataset

Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap

Stat6 1 dataset

Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap

TFAP2A 1 dataset

ChIP WA09 GSE105081.TFAP2A.WA09 145 bp overlap

TLX2 1 dataset

Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap

TRPS1 2 datasets

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

UNCX 1 dataset

Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap

VAX1 1 dataset

Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap

VAX2 1 dataset

Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap

VSX1 1 dataset

Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap

VSX2 1 dataset

Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap

ZNF320 2 datasets

Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap

Motif DE_48h DE_48h-ZNF320_MA1976.2 20 bp overlap

ZNF75A 1 dataset

Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap

ZNF85 2 datasets

Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap

Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap

ZSCAN4 1 dataset

Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap

Znf423 1 dataset

Motif DE_36h DE_36h-Znf423_MA0116.1 15 bp overlap

mix-a 1 dataset

Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap