chr1 : 93,691,208 93,691,662
454 bp 57 TFs 1 linked gene
This 454 bp open chromatin element is linked to BCAR3 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BCAR3 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:93,686,208 – 93,696,662
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 140 bp overlap
BRD2 2 datasets
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 99 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 257 bp overlap
BRD4 7 datasets
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 264 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 139 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 84 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 354 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 217 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 454 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 255 bp overlap
CDKN1B 3 datasets
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 189 bp overlap
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 157 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 231 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 191 bp overlap
CTCF 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 164 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 140 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 391 bp overlap
EGR1 1 dataset
ChIP Ishikawa ENCFF550FKT 243 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 330 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 319 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 172 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 453 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 454 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 308 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 454 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 450 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 394 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 179 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 330 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 216 bp overlap
IKZF1 1 dataset
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 167 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 107 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 72 bp overlap
JUN 6 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 346 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 285 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 205 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 274 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 269 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 188 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 225 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 243 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 164 bp overlap
ChIP HEK293 ENCFF588INF 344 bp overlap
MAX 4 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 220 bp overlap
ChIP Ishikawa ENCFF064TDQ 375 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 195 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 161 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 164 bp overlap
MYOD1 4 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 211 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 347 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 164 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 170 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 442 bp overlap
NEUROG2 5 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 211 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 177 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 198 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 153 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 159 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 454 bp overlap
RAD21 4 datasets
ChIP RH4 GSE83726.RAD21.RH4 206 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 80 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 72 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 115 bp overlap
RELA 1 dataset
ChIP BJAB GSE117250.RELA.BJAB 218 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 170 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 406 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 222 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 366 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 281 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 92 bp overlap
SNAI2 4 datasets
ChIP RD GSE137168.SNAI2.RD 199 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 202 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 157 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 117 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 369 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 139 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 88 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 93 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 286 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 404 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 167 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 273 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 168 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 226 bp overlap
ZFP36 1 dataset
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 123 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 454 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 441 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 454 bp overlap
ZNF341 2 datasets
ChIP HEK293 GSE76494.ZNF341.HEK293 164 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 323 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 230 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 56 bp overlap