chr4 : 168,831,310 168,831,437
127 bp 41 TFs 2 linked genes
This 127 bp open chromatin element is linked to PALLD and ENSG00000249609 and is bound by 41 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
PALLD 605 bp At TSS Proximity
ENSG00000249609 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:168,826,310 – 168,836,437
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 64 bp overlap
BRD4 1 dataset
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 127 bp overlap
CDK8 4 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 88 bp overlap
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 98 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 127 bp overlap
ChIP leiomyoma_PT916 GSE128230.CDK8.leiomyoma_PT916 65 bp overlap
EGR1 1 dataset
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 127 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 110 bp overlap
ESR1 2 datasets
ChIP MCF-7_Fulv GSE115607.ESR1.MCF-7_Fulv 127 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 59 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 127 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT1063 GSE128230.FOS.leiomyoma_PT1063 64 bp overlap
HNF4A 2 datasets
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 127 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 127 bp overlap
HOXB13 2 datasets
ChIP G-401 GSE65381.HOXB13.G-401 127 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 61 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 127 bp overlap
JUN 1 dataset
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 64 bp overlap
JUND 2 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 83 bp overlap
ChIP HCT116 ENCFF748ZQX 127 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 50 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 88 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 82 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 72 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 97 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 51 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 127 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 127 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 127 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 127 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 127 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF754JQR 102 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 127 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 83 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 120 bp overlap
RNF2 3 datasets
ChIP K-562 ENCSR138FUZ.RNF2.K-562 76 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 127 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 127 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE76181.RUNX1.Jurkat 127 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 92 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 94 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 56 bp overlap
SPI1 15 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 91 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 80 bp overlap
ChIP GM12891 ENCFF563IUT 59 bp overlap
ChIP HL-60 ENCFF645GBT 100 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 73 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 95 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 57 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 113 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 63 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 97 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 91 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 127 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 64 bp overlap
ChIP primary-monocyte_LPS-4h_donorO GSE128834.SPI1.primary-monocyte_LPS-4h_donorO 112 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 76 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 63 bp overlap
TCF7L2 7 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 127 bp overlap
ChIP HCT-116_C16 GSE127960.TCF7L2.HCT-116_C16 127 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 127 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 127 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 127 bp overlap
ChIP HCT116 ENCFF038POZ 127 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 127 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 93 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCFF809BPK 52 bp overlap
ZNF24 3 datasets
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 94 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 81 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 78 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 101 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 93 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 125 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 127 bp overlap