chr4 : 123,408,532 123,408,958
426 bp 66 TFs 0 linked genes
This 426 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:123,403,532 – 123,413,958
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ARID2 4 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 130 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 370 bp overlap
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 405 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 369 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 426 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 170 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 426 bp overlap
DPF2 4 datasets
ChIP BIN-67 GSE117734.DPF2.BIN-67 404 bp overlap
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 426 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 306 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 426 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 143 bp overlap
DUXA 1 dataset
Motif ES_0h ES_0h-DUXA_MA0884.2 13 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 273 bp overlap
ELF3 3 datasets
ChIP HepG2 ENCFF633ULY 335 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 142 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 246 bp overlap
ESR1 1 dataset
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 277 bp overlap
FOSL2 1 dataset
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 198 bp overlap
FOXA1 1 dataset
ChIP PDAC GSE64557.FOXA1.PDAC 369 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 242 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 376 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 203 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 359 bp overlap
GFI1 2 datasets
ChIP Hep-G2 ENCSR849FVL.GFI1.Hep-G2 188 bp overlap
ChIP HepG2 ENCFF472INF 392 bp overlap
HMBOX1 1 dataset
Motif ES_0h ES_0h-HMBOX1_MA0895.2 7 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 426 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 426 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 426 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 379 bp overlap
JUN 1 dataset
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 94 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 426 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 114 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 145 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 194 bp overlap
KMT2C 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 426 bp overlap
KMT2D 2 datasets
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 426 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 426 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 248 bp overlap
MBD4 1 dataset
ChIP HepG2 ENCFF785HSD 104 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 186 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 203 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 175 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 200 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 92 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 92 bp overlap
PHF5A 2 datasets
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 164 bp overlap
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 108 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 190 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 170 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 359 bp overlap
ChIP HepG2 ENCFF508UTS 360 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 105 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 270 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 136 bp overlap
PROP1 1 dataset
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF292RVQ 145 bp overlap
REST 2 datasets
ChIP Panc1 ENCFF518EEQ 426 bp overlap
ChIP Panc1 ENCFF518EEQ 185 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 352 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 426 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 426 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 426 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 426 bp overlap
SMARCB1 1 dataset
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 191 bp overlap
SMARCC1 11 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 238 bp overlap
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 336 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 268 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 188 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 377 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 426 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 261 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 310 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 426 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 426 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 373 bp overlap
SP2 1 dataset
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
ChIP HEK293 ENCSR141PZA.SP3.HEK293 246 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 426 bp overlap
SS18 4 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 299 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 249 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 426 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 426 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 106 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 120 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 133 bp overlap
SUZ12 1 dataset
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 180 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
TFAP4 1 dataset
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 140 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 426 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 119 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 384 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 315 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 353 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 115 bp overlap
ZNF350 1 dataset
ChIP HEK293 GSE76494.ZNF350.HEK293 141 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap