chr4 : 104,907,181 – 104,907,582
401 bp 41 TFs 1 linked gene
This 401 bp open chromatin element is linked to ENSG00000248373 and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000248373 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:104,902,181 – 104,912,582
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 111 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 123 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 82 bp overlap
ATF1 3 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 322 bp overlap
ChIP K562 ENCFF817JQF 360 bp overlap
ChIP K562 ENCFF817JQF 401 bp overlap
BACH1 1 dataset
ChIP K-562 ENCSR740NPG.BACH1.K-562 252 bp overlap
BRD4 3 datasets
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 72 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 210 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 342 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 80 bp overlap
CTCF 30 datasets
ChIP DOHH2 ENCFF637WNW 300 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 153 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 105 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 76 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 89 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 350 bp overlap
ChIP K562 ENCFF111MGE 131 bp overlap
ChIP K562 ENCFF400DFR 136 bp overlap
ChIP MCF-7 ENCFF139NQI 154 bp overlap
ChIP MCF-7 ENCFF162GNE 131 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 123 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 96 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 152 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 88 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 174 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 116 bp overlap
ChIP VCaP ENCFF858YQT 304 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 183 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 92 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 212 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 208 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 132 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 141 bp overlap
ChIP islet ERP004003.CTCF.islet 135 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 278 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 124 bp overlap
ChIP myotube ENCFF981UHL 179 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 122 bp overlap
ChIP right lobe of liver ENCFF250KSY 227 bp overlap
ChIP right lobe of liver ENCFF956UTA 241 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 161 bp overlap
ELF1 6 datasets
ChIP K-562 ENCSR975SSR.ELF1.K-562 151 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 112 bp overlap
ChIP K562 ENCFF886KFV 359 bp overlap
ChIP MCF-7 ENCFF687CWI 246 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 192 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 179 bp overlap
ERG 2 datasets
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 69 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 157 bp overlap
ESR1 17 datasets
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 224 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 381 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 327 bp overlap
ChIP MCF-7_800 GSE115607.ESR1.MCF-7_800 248 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 239 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 401 bp overlap
ChIP MCF-7_GDC-0927 GSE117941.ESR1.MCF-7_GDC-0927 243 bp overlap
ChIP MCF-7_RAD1901 GSE115607.ESR1.MCF-7_RAD1901 344 bp overlap
ChIP MCF-7_Sat-H3B-6545 GSE115607.ESR1.MCF-7_Sat-H3B-6545 217 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 101 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 313 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 361 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 154 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 401 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 297 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 401 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 343 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 258 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 282 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 304 bp overlap
GABPA 8 datasets
ChIP K-562 ENCSR290MUH.GABPA.K-562 401 bp overlap
ChIP K-562 ENCSR000BLO.GABPA.K-562 127 bp overlap
ChIP K562 ENCFF139LXS 354 bp overlap
ChIP MCF-7 ENCFF735CHO 167 bp overlap
ChIP MCF-7 ENCSR000BUK.GABPA.MCF-7 142 bp overlap
ChIP VCaP GSE49091.GABPA.VCaP 92 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 116 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 111 bp overlap
GABPB1 3 datasets
ChIP K-562 ENCSR138YYY.GABPB1.K-562 282 bp overlap
ChIP K562 ENCFF015GDS 219 bp overlap
ChIP K562 ENCFF885NMS 330 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 266 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 241 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 276 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 237 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 246 bp overlap
JARID2 1 dataset
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 212 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 287 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 253 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 220 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 267 bp overlap
ChIP K562 ENCFF047YKA 366 bp overlap
ONECUT1 1 dataset
ChIP liver ERP002306.ONECUT1.liver 119 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 194 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_30 GSE104399.PGR.breast_tumor_Male_30 199 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 93 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 144 bp overlap
ChIP K562 ENCFF066JWO 275 bp overlap
SETDB1 3 datasets
ChIP HEK293 ENCFF676PLV 331 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 233 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 233 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 196 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 139 bp overlap
ChIP K562 ENCFF410ORC 175 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 233 bp overlap
STAT3 2 datasets
ChIP MCF-7 GSE152203.STAT3.MCF-7 312 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 78 bp overlap
TRIP13 1 dataset
ChIP K-562 ENCSR154EIH.TRIP13.K-562 187 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 261 bp overlap
ZBTB12 1 dataset
ChIP K-562 ENCSR172OSX.ZBTB12.K-562 186 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 173 bp overlap
ChIP K562 ENCFF521DSV 121 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 401 bp overlap
ChIP K562 ENCFF352SDL 401 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 384 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 158 bp overlap
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