chr4 : 103,015,292 – 103,015,988

696 bp 75 TFs 1 linked gene

This 696 bp open chromatin element is linked to SLC9B1 and is bound by 75 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
SLC9B1		3.7 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

75 transcription factors

ATF3 2 datasets

ChIP K-562 ENCSR028UIU.ATF3.K-562 299 bp overlap

ChIP K562 ENCFF604FPV 500 bp overlap

ATF4 2 datasets

Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap

ChIP K-562 ENCSR145TSJ.ATF4.K-562 272 bp overlap

Atf1 1 dataset

Motif DE_60h DE_60h-Atf1_MA0604.1 8 bp overlap

BACH1 1 dataset

Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap

BCL11A 1 dataset

Motif DE_60h DE_60h-BCL11A_MA2324.1 7 bp overlap

BHLHE22 1 dataset

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

Bhlha15 1 dataset

Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap

CEBPA 1 dataset

ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 165 bp overlap

CEBPB 7 datasets

ChIP HepG2 ENCFF536NTI 221 bp overlap

ChIP IMR-90 ENCFF468UGY 63 bp overlap

ChIP K-562 ENCSR000EHE.CEBPB.K-562 188 bp overlap

ChIP K-562 ENCSR000BRQ.CEBPB.K-562 136 bp overlap

ChIP K562 ENCFF189VBN 271 bp overlap

ChIP K562 ENCFF584CTB 525 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 130 bp overlap

CEBPG 1 dataset

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

CTCF 1 dataset

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 74 bp overlap

Cebpa 5 datasets

ChIP BLaER1 ENCFF093OYK 564 bp overlap

ChIP BLaER1 ENCFF346MCV 251 bp overlap

ChIP BLaER1 ENCFF680YXW 360 bp overlap

ChIP BLaER1 ENCFF798NMV 303 bp overlap

ChIP BLaER1 ENCFF858JKM 457 bp overlap

DUX4 1 dataset

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

EBF1 1 dataset

ChIP GM12878 ENCFF167CZS 321 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap

FOSL1::JUND 2 datasets

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

Motif DE_60h DE_60h-FOSL1JUND_MA1143.2 9 bp overlap

FOSL2::JUN 1 dataset

Motif DE_60h DE_60h-FOSL2JUN_MA1131.2 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 517 bp overlap

ChIP DE DE-FOXA2-2 573 bp overlap

GATA1 1 dataset

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap

ChIP DE DE-GATA4-1 693 bp overlap

ChIP DE DE-GATA4-2 696 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 616 bp overlap

ChIP DE DE-GATA6-2 696 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 368 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 391 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

IRF4 1 dataset

Motif DE_60h DE_60h-IRF4_MA1419.2 14 bp overlap

IRF5 1 dataset

Motif DE_60h DE_60h-IRF5_MA1420.1 14 bp overlap

IRF8 1 dataset

Motif DE_60h DE_60h-IRF8_MA0652.2 13 bp overlap

Irf1 2 datasets

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

JUN::JUNB 1 dataset

Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap

MSANTD3 1 dataset

Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap

MTA2 2 datasets

ChIP GM12878 ENCFF615CWQ 449 bp overlap

ChIP GM12878 ENCSR293QAR.MTA2.GM12878 320 bp overlap

MYF5 1 dataset

Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap

NEUROD1 1 dataset

Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap

NFATC3 2 datasets

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 262 bp overlap

NHLH2 1 dataset

Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap

NKX2-2 2 datasets

Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_60h DE_60h-NKX2-5_MA0063.3 7 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap

NR2F1 3 datasets

Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap

ChIP GM12878 ENCFF273VKX 283 bp overlap

ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 355 bp overlap

Nanog 1 dataset

Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap

Neurod2 2 datasets

Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

Nfat5 1 dataset

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 1 dataset

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

Nr2f6 1 dataset

Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap

Olig2 1 dataset

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

PBX3 1 dataset

Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap

POU3F3 1 dataset

Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap

PPARD 1 dataset

Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap

Pparg::Rxra 2 datasets

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap

RXRB 1 dataset

Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap

RXRG 1 dataset

Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap

Rxra 1 dataset

Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 459 bp overlap

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 619 bp overlap

SOX15 1 dataset

Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 335 bp overlap

SPI1 1 dataset

ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 120 bp overlap

STAT1::STAT2 1 dataset

Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap

Sox6 1 dataset

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

Stat2 2 datasets

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

TBX21 2 datasets

ChIP GM12878 ENCFF951HUW 400 bp overlap

ChIP GM12878 ENCSR739IHN.TBX21.GM12878 330 bp overlap

TCF7L1 1 dataset

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

THRB 1 dataset

Motif DE_60h DE_60h-THRB_MA1574.2 13 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Tcf12 1 dataset

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

ZBTB18 1 dataset

Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap

ZKSCAN5 1 dataset

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF135 1 dataset

Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap

ZNF384 1 dataset

ChIP GM12878 ENCFF229VSP 165 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap