chr4 : 99,013,425 99,013,852
427 bp 58 TFs 0 linked genes
This 427 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:99,008,425 – 99,018,852
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ARID3A 2 datasets
ChIP HepG2 ENCFF341DES 427 bp overlap
ChIP HepG2 ENCFF341DES 291 bp overlap
ATF4 3 datasets
ChIP HepG2 ENCFF819ULE 307 bp overlap
ChIP HepG2 ENCFF903ADR 359 bp overlap
ChIP K562 ENCFF674KTF 383 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 427 bp overlap
CDX1 1 dataset
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 304 bp overlap
CEBPB 3 datasets
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP HepG2 ENCFF074JWB 201 bp overlap
ChIP HepG2 ENCFF536NTI 221 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 176 bp overlap
CTCF 1 dataset
ChIP coronary artery ENCFF483TFF 261 bp overlap
Dux 1 dataset
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 279 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 225 bp overlap
ChIP HepG2 ENCFF740VZW 207 bp overlap
FOXA2 1 dataset
ChIP HepG2 ENCFF533COJ 220 bp overlap
GABPB1 1 dataset
ChIP WTC11 ENCFF166QKI 354 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 182 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 145 bp overlap
HNF1A 4 datasets
ChIP HepG2 ENCFF352VYI 411 bp overlap
ChIP HepG2 ENCFF352VYI 216 bp overlap
ChIP HepG2 ENCFF540TRC 422 bp overlap
ChIP HepG2 ENCFF540TRC 341 bp overlap
HNF4G 1 dataset
ChIP HepG2 ENCFF323ATZ 264 bp overlap
HOMEZ 2 datasets
ChIP HepG2 ENCFF800ZQH 259 bp overlap
ChIP HepG2 ENCFF800ZQH 302 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF348IBL 269 bp overlap
ChIP K562 ENCFF771OHZ 238 bp overlap
KLF6 1 dataset
ChIP HepG2 ENCFF834YJR 427 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 427 bp overlap
MAX 2 datasets
ChIP HepG2 ENCFF507HCX 427 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MED1 5 datasets
ChIP G296S GSE85628.MED1.G296S 260 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 260 bp overlap
ChIP G296S_4 GSE85628.MED1.G296S_4 103 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 212 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 53 bp overlap
MYBL2 1 dataset
ChIP HepG2 ENCFF650QJC 427 bp overlap
MZF1 1 dataset
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 337 bp overlap
NFYB 2 datasets
Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap
ChIP HepG2 ENCFF174VYX 396 bp overlap
NFYC 2 datasets
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF836FYP 271 bp overlap
NR2F2 3 datasets
ChIP liver ENCFF427MRU 329 bp overlap
ChIP liver ENCFF565JGD 158 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 96 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 389 bp overlap
POLR2A 11 datasets
ChIP GM23338 ENCFF450WCS 357 bp overlap
ChIP H1 ENCFF566JSR 241 bp overlap
ChIP H1 ENCFF833NJP 183 bp overlap
ChIP HepG2 ENCFF350RIU 192 bp overlap
ChIP HepG2 ENCFF736SLT 338 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 368 bp overlap
ChIP heart left ventricle ENCFF591JWH 207 bp overlap
ChIP prostate gland ENCFF881OMH 213 bp overlap
ChIP sigmoid colon ENCFF653CQA 360 bp overlap
ChIP sigmoid colon ENCFF653CQA 268 bp overlap
ChIP sigmoid colon ENCFF725QFT 289 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 217 bp overlap
ChIP HepG2 ENCFF508UTS 263 bp overlap
POU5F1 1 dataset
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP liver ENCFF240FWT 354 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 410 bp overlap
ChIP liver ENCFF077DAP 206 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 294 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 76 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX12 1 dataset
Motif ES_0h ES_0h-SOX12_MA1561.2 10 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 221 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 324 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 427 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 324 bp overlap
SRF 6 datasets
ChIP H1 ENCFF036PEF 74 bp overlap
ChIP Hep-G2 ENCSR000BLV.SRF.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF625QHW 173 bp overlap
ChIP Ishikawa ENCFF992QXM 233 bp overlap
ChIP K562 ENCFF766EOO 309 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 135 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox5 1 dataset
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 362 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 168 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 220 bp overlap
TBP 7 datasets
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
ChIP H1 ENCFF859IIO 295 bp overlap
ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 183 bp overlap
ChIP HepG2 ENCFF023IVD 296 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 145 bp overlap
ChIP hESC GSE122298.TBP.hESC 136 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 180 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 222 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 279 bp overlap
ZNF214 1 dataset
Motif ES_0h ES_0h-ZNF214_MA1975.2 13 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 91 bp overlap
ZNF85 1 dataset
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap