chr4 : 87,043,057 – 87,043,388

331 bp 55 TFs 0 linked genes

This 331 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

55 transcription factors

BHLHE40 1 dataset

ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 228 bp overlap

BRD4 1 dataset

ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 272 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 167 bp overlap

CREBBP 1 dataset

ChIP MCF-7 ERP000901.CREBBP.MCF-7 178 bp overlap

DPF2 1 dataset

ChIP GM12878 ENCSR509FWH.DPF2.GM12878 131 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 58 bp overlap

EBF1 1 dataset

ChIP GM12878 ENCFF167CZS 177 bp overlap

EP300 2 datasets

ChIP Ishikawa ENCFF364ZWT 331 bp overlap

ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 245 bp overlap

ESR1 4 datasets

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 242 bp overlap

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 204 bp overlap

ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 244 bp overlap

ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 187 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 153 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

GATA1 1 dataset

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 61 bp overlap

GATA6 3 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 284 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 251 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 203 bp overlap

GTF2F1 2 datasets

ChIP Hep-G2 ENCSR382PVA.GTF2F1.Hep-G2 172 bp overlap

ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 172 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 72 bp overlap

KLF10 1 dataset

Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap

KLF12 1 dataset

Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap

KLF14 1 dataset

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

KLF4 1 dataset

ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 214 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

KLF7 1 dataset

Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 88 bp overlap

MAX 2 datasets

ChIP Ishikawa ENCFF064TDQ 331 bp overlap

ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 199 bp overlap

MED1 1 dataset

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 223 bp overlap

MLLT1 1 dataset

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 331 bp overlap

MTA2 1 dataset

ChIP GM12878 ENCSR293QAR.MTA2.GM12878 253 bp overlap

MYC 1 dataset

ChIP P493-6_SHCTR GSE60223.MYC.P493-6_SHCTR 117 bp overlap

NFATC3 1 dataset

ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 213 bp overlap

NR3C1 1 dataset

ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 108 bp overlap

PAX5 2 datasets

ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 227 bp overlap

ChIP GM12878 ENCSR000BHD.PAX5.GM12878 262 bp overlap

POLR2A 2 datasets

ChIP GM19193 ENCFF599VTO 331 bp overlap

ChIP spleen ENCFF044PYR 308 bp overlap

POU5F1 1 dataset

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 322 bp overlap

PRDM6 1 dataset

ChIP HEK293 ENCFF283AJL 91 bp overlap

PRPF4 1 dataset

ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 263 bp overlap

RAD21 1 dataset

ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 163 bp overlap

RELA 2 datasets

ChIP 786-O GSE86092.RELA.786-O 195 bp overlap

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 60 bp overlap

RELB 1 dataset

ChIP GM12878 ENCSR387QUV.RELB.GM12878 238 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 3 datasets

ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 199 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 275 bp overlap

ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 331 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SP1 1 dataset

Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

SP4 1 dataset

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

TARDBP 1 dataset

ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 331 bp overlap

TBX21 1 dataset

ChIP GM12878 ENCSR739IHN.TBX21.GM12878 331 bp overlap

TCF12 2 datasets

ChIP Ishikawa ENCFF467DDW 329 bp overlap

ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 293 bp overlap

TEAD4 1 dataset

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 216 bp overlap

ZNF18 3 datasets

ChIP HEK293 ENCFF066NGR 223 bp overlap

ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 224 bp overlap

ChIP HEK293 GSE76494.ZNF18.HEK293 212 bp overlap

ZNF189 1 dataset

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 331 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF331 2 datasets

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF341 1 dataset

ChIP HEK293 GSE76494.ZNF341.HEK293 131 bp overlap

ZNF687 2 datasets

ChIP GM12878 ENCFF233SGE 314 bp overlap

ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 146 bp overlap

ZSCAN22 1 dataset

ChIP HEK293 GSE76494.ZSCAN22.HEK293 169 bp overlap