Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

56 transcription factors

BRF1 1 dataset

ChIP H9_Activin GSE94418.BRF1.H9_Activin 195 bp overlap

CRY1 1 dataset

ChIP U2OS GSE44236.CRY1.U2OS 156 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 207 bp overlap

CTCF 25 datasets

ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 183 bp overlap

ChIP GM04648 GSE148179.CTCF.GM04648 225 bp overlap

ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 168 bp overlap

ChIP GM23338 ENCFF772DML 201 bp overlap

ChIP H1 ENCFF230QSV 165 bp overlap

ChIP H1 ENCFF414GZI 217 bp overlap

ChIP H1 ENCFF764RHO 277 bp overlap

ChIP H9 ENCFF152GTF 186 bp overlap

ChIP H9 ENCFF152GTF 298 bp overlap

ChIP HCT-116 GSE131606.CTCF.HCT-116 471 bp overlap

ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 179 bp overlap

ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 266 bp overlap

ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 438 bp overlap

ChIP WA01 ENCSR000BNH.CTCF.WA01 175 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 121 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 181 bp overlap

ChIP endodermal cell ENCFF471YCZ 207 bp overlap

ChIP hESC_D15 GSE116862.CTCF.hESC_D15 190 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 164 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 200 bp overlap

ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 251 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 151 bp overlap

ChIP neural progenitor cell ENCFF420RBO 196 bp overlap

ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 327 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 214 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 376 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

ELF1 1 dataset

ChIP GM12878 ENCSR000BMB.ELF1.GM12878 84 bp overlap

ESR1 4 datasets

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 205 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 167 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 252 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 257 bp overlap

EZH2 3 datasets

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 126 bp overlap

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 269 bp overlap

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 90 bp overlap

FOS::JUND 1 dataset

Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap

FOSL1::JUN 1 dataset

Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 1 dataset

Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 167 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HOXB4 1 dataset

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

HOXD3 1 dataset

Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap

HOXD4 1 dataset

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

KDM4C 1 dataset

ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 145 bp overlap

MECOM 2 datasets

ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 219 bp overlap

ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 263 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MYF6 1 dataset

Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap

NFYB 1 dataset

Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap

NOTCH3 1 dataset

ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 179 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 191 bp overlap

PGR 1 dataset

Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap

POU5F1 2 datasets

ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 260 bp overlap

POU6F1 1 dataset

Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

Plagl1 1 dataset

Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap

RAD21 8 datasets

ChIP H1 ENCFF698EWO 241 bp overlap

ChIP H1 ENCFF967OJF 245 bp overlap

ChIP WA09 GSE105028.RAD21.WA09 177 bp overlap

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 142 bp overlap

ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 194 bp overlap

ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 232 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 198 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 221 bp overlap

RELA 1 dataset

ChIP 786-O GSE86092.RELA.786-O 247 bp overlap

REST 1 dataset

ChIP PANC-1 ENCSR000BJO.REST.PANC-1 120 bp overlap

RUNX1 1 dataset

ChIP Jurkat GSE85524.RUNX1.Jurkat 271 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE36578.SMAD3.BG03 106 bp overlap

SMC1 1 dataset

ChIP HCT-116 GSE131606.SMC1.HCT-116 184 bp overlap

SMC3 1 dataset

ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 181 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 156 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 242 bp overlap

SUZ12 1 dataset

ChIP ProEs GSE59087.SUZ12.ProEs 125 bp overlap

Spz1 1 dataset

Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 227 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

TP63 1 dataset

ChIP breast-organoid GSE113909.TP63.breast-organoid 156 bp overlap

TWIST1 1 dataset

Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZNF138 1 dataset

ChIP WTC11 ENCFF800FUU 264 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 141 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 248 bp overlap

Genome Browser