chr3 : 181,698,205 181,698,506
301 bp 40 TFs 2 linked genes
This 301 bp open chromatin element is linked to ENSG00000276690 and ENSG00000239381 and is bound by 40 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000276690 1.1 kb Proximal Proximity
ENSG00000239381 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:181,693,205 – 181,703,506
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 192 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 301 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 115 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 257 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 240 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 223 bp overlap
CTCF 14 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 223 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 228 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 132 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 213 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 204 bp overlap
ChIP OCI-LY1 ENCFF455ESK 301 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 301 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 271 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 92 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 301 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 239 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 140 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 301 bp overlap
EP300 2 datasets
ChIP H1 ENCFF937OPV 155 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 140 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 162 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 238 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 301 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 261 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 175 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 134 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 212 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 105 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 102 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 239 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 293 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 194 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 90 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 171 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 83 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 226 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 131 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 168 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 249 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 301 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMARCA4 5 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 231 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 301 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 85 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 301 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 174 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 217 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 118 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 177 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 102 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 190 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 100 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 288 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF341 4 datasets
ChIP HEK293 ENCFF944VMC 209 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 290 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 173 bp overlap
ChIP LBCL_EBV-transformed GSE107719.ZNF341.LBCL_EBV-transformed 290 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap