chr3 : 140,822,781 140,823,440
659 bp 55 TFs 1 linked gene
This 659 bp open chromatin element is linked to SLC25A36 and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC25A36 118.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:140,817,781 – 140,828,440
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
BACH1 2 datasets
ChIP H1 ENCFF282VDB 160 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 100 bp overlap
BACH2 4 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 58 bp overlap
ChIP DOHH2 GSE69558.BACH2.DOHH2 245 bp overlap
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 129 bp overlap
ChIP OCI-Ly7 GSE69558.BACH2.OCI-Ly7 151 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 335 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 114 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 213 bp overlap
CTCF 48 datasets
ChIP DOHH2 ENCFF637WNW 401 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 264 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 186 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 174 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 173 bp overlap
ChIP GM23338 ENCFF531QOI 409 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 189 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 169 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 137 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 143 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 153 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 146 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 114 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 293 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 286 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 143 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 153 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 142 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 188 bp overlap
ChIP Loucy ENCFF359TVQ 338 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 276 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 142 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 153 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 164 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 412 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 229 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 228 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 353 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 174 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 162 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 119 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 218 bp overlap
ChIP endodermal cell ENCFF471YCZ 190 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
ChIP myotube ENCFF981UHL 371 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 258 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 150 bp overlap
EBF1 2 datasets
ChIP LCL GSE75503.EBF1.LCL 58 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 157 bp overlap
ELF1 2 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 165 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 194 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 367 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 199 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 209 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 182 bp overlap
ChIP HepG2 ENCFF354ACD 262 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 198 bp overlap
FOXA1 7 datasets
ChIP HepG2 ENCFF207NVJ 226 bp overlap
ChIP HepG2 ENCFF361KNY 74 bp overlap
ChIP HepG2 ENCFF740VZW 191 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 168 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 288 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 140 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 175 bp overlap
FOXA2 7 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 166 bp overlap
ChIP DE DE-FOXA2-1 659 bp overlap
ChIP DE DE-FOXA2-2 659 bp overlap
ChIP HepG2 ENCFF533COJ 186 bp overlap
ChIP HepG2 ENCFF570ABM 223 bp overlap
ChIP HepG2 ENCFF894AYY 152 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 172 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 153 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 202 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 608 bp overlap
ChIP DE DE-GATA4-2 659 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 565 bp overlap
ChIP DE DE-GATA6-2 629 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 659 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 586 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 335 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 266 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 222 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 187 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 7 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 162 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 240 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 237 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 165 bp overlap
ChIP Hep-G2 ENCSR000EEU.HNF4A.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF146SSF 303 bp overlap
ChIP HepG2 ENCFF669NAM 248 bp overlap
MAFF 5 datasets
ChIP GM12878 ENCSR237YZZ.MAFF.GM12878 105 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 127 bp overlap
ChIP HepG2 ENCFF452YUT 130 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 116 bp overlap
ChIP K562 ENCFF071YKK 56 bp overlap
MAFG 3 datasets
ChIP HepG2 ENCFF422NZT 184 bp overlap
ChIP K-562 ENCSR818DQV.MAFG.K-562 276 bp overlap
ChIP K562 ENCFF455EEO 146 bp overlap
MAFK 16 datasets
ChIP A549 ENCFF371EPR 180 bp overlap
ChIP GM12878 ENCFF605LFT 124 bp overlap
ChIP GM12878 ENCSR000DYV.MAFK.GM12878 77 bp overlap
ChIP H1 ENCFF854XWE 107 bp overlap
ChIP HeLa-S3 ENCFF304XGR 148 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 131 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 176 bp overlap
ChIP HepG2 ENCFF743ZOF 122 bp overlap
ChIP HepG2 ENCFF767LDG 104 bp overlap
ChIP IMR-90 ENCFF336DHZ 116 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 119 bp overlap
ChIP K562 ENCFF380WHM 145 bp overlap
ChIP MCF-7 ENCFF558JLG 224 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 286 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 227 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 229 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 156 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 59 bp overlap
NFIL3 2 datasets
ChIP Hep-G2 GSE97661.NFIL3.Hep-G2 157 bp overlap
ChIP HepG2 ENCFF686VLI 316 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 179 bp overlap
ChIP HepG2 ENCFF526NOJ 411 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 142 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 355 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 158 bp overlap
RAD21 3 datasets
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 139 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 131 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 179 bp overlap
RFX5 2 datasets
ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 88 bp overlap
ChIP HepG2 ENCFF065UQI 181 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 466 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 304 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 306 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 530 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 490 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 125 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 106 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 159 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 320 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 502 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 231 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 377 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 112 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 137 bp overlap
XBP1 1 dataset
ChIP LNCaP_px330 GSE121880.XBP1.LNCaP_px330 160 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 247 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 82 bp overlap
ZNF2 1 dataset
ChIP HEK293T GSE78099.ZNF2.HEK293T 210 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 173 bp overlap