chr3 : 99,633,994 99,634,168
174 bp 41 TFs 1 linked gene
This 174 bp open chromatin element is linked to COL8A1 and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
COL8A1 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:99,628,994 – 99,639,168
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 174 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 161 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 96 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 129 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 154 bp overlap
BRD4 11 datasets
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 174 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 174 bp overlap
ChIP MDA-MB-231_JQ1-pos_L GSE136151.BRD4.MDA-MB-231_JQ1-pos_L 140 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 164 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 164 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 128 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 168 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 99 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 152 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 174 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 174 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 174 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 174 bp overlap
CDKN1B 1 dataset
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 174 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 96 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 100 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 141 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 174 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 174 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCFF364ZWT 100 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 174 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 174 bp overlap
ChIP MCF-7 ENCFF282FWZ 174 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 83 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 174 bp overlap
FOSL1 1 dataset
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 174 bp overlap
FOSL2 4 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 52 bp overlap
ChIP A549 ENCFF195CES 84 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 65 bp overlap
ChIP MDA-MB-231 GSE132098.FOSL2.MDA-MB-231 174 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 153 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 172 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCFF578VDD 171 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 163 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 167 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 174 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 174 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 134 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 174 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 174 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 174 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 169 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 174 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 174 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 136 bp overlap
JUND 3 datasets
ChIP HeLa-S3 ENCFF642OHL 55 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 142 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 109 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 122 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 142 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 172 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 174 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 91 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 174 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 174 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 174 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 174 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 174 bp overlap
RAD21 1 dataset
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 109 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 157 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 165 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 90 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 60 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 133 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 174 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 174 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 174 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 174 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 174 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 174 bp overlap
SRF 1 dataset
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 100 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 174 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 174 bp overlap
STAT3 3 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 127 bp overlap
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 174 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 164 bp overlap
TEAD1 3 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 174 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 174 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 174 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 107 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 174 bp overlap