chr3 : 70,631,854 – 70,632,408
554 bp 58 TFs 0 linked genes
This 554 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:70,626,854 – 70,637,408
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AR 12 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 98 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 66 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 130 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 75 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 98 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 535 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 69 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 92 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 137 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 93 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 238 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 79 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 51 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 348 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 242 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 150 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 255 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
ESR1 2 datasets
Motif DE_12h DE_12h-ESR1_MA0112.4 15 bp overlap
Motif ES_0h ES_0h-ESR1_MA0112.4 15 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 554 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 258 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 8 datasets
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 248 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 72 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 115 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 73 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 94 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 83 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 82 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 124 bp overlap
FOXH1 2 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 245 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 336 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 347 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 220 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 220 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HOXB13 12 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 139 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 197 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 143 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 87 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 131 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 120 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 153 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 179 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 108 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 96 bp overlap
ChIP prostate_P5 GSE130408.HOXB13.prostate_P5 91 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 140 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 265 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 433 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 410 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 554 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 489 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 512 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NIPBL 3 datasets
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 263 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 252 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 368 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 344 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
ONECUT1 2 datasets
Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap
Motif ES_0h ES_0h-ONECUT1_MA0679.3 9 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PBX1 2 datasets
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
Motif ES_0h ES_0h-PBX1_MA0070.2 9 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 82 bp overlap
POU5F1 5 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 394 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 100 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 194 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 383 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 191 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 241 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 261 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 366 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 201 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 201 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 390 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 201 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF213 3 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 149 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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