Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

54 transcription factors

ARNT::HIF1A 1 dataset

Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 126 bp overlap

Ahr::Arnt 1 dataset

Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap

Atoh1 1 dataset

Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 133 bp overlap

BRD4 2 datasets

ChIP HAP1 GSE108387.BRD4.HAP1 82 bp overlap

ChIP hESC GSE33281.BRD4.hESC 62 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 140 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 278 bp overlap

CREBBP 1 dataset

ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 62 bp overlap

EPAS1 1 dataset

Motif ES_0h ES_0h-EPAS1_MA2325.1 9 bp overlap

ETS1 1 dataset

ChIP GM23338 ENCFF701IZH 320 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 60 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 198 bp overlap

GATA6 4 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 304 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 320 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 426 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 245 bp overlap

HAND2 1 dataset

Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap

HIF1A 1 dataset

Motif ES_0h ES_0h-HIF1A_MA1106.2 6 bp overlap

JUN 8 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 318 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 360 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 392 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 284 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 296 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 364 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 284 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 259 bp overlap

KLF11 1 dataset

Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap

KLF6 1 dataset

Motif ES_0h ES_0h-KLF6_MA1517.2 9 bp overlap

MAX 1 dataset

ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 136 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 244 bp overlap

MEIS1 1 dataset

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

NANOG 7 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 256 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 194 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 197 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 192 bp overlap

NEUROD1 1 dataset

Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap

NR2F1 1 dataset

Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap

NUTM1 1 dataset

ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 76 bp overlap

Neurod2 1 dataset

Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap

Nr1h3::Rxra 1 dataset

Motif ES_0h ES_0h-Nr1h3Rxra_MA0494.2 16 bp overlap

POLR2A 2 datasets

ChIP GM23338 ENCFF450WCS 341 bp overlap

ChIP H1 ENCFF566JSR 145 bp overlap

POU5F1 5 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 402 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 244 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 195 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 179 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 247 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 307 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 121 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 138 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 179 bp overlap

SIN3A 2 datasets

ChIP H1 ENCFF042ZSL 423 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 133 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 249 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 298 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 339 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 263 bp overlap

SMAD3 2 datasets

ChIP BG03 GSE21614.SMAD3.BG03 186 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 152 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 97 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 338 bp overlap

SP8 1 dataset

Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap

SPIB 1 dataset

Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap

TBP 2 datasets

ChIP H1 ENCFF859IIO 329 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 65 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 172 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 314 bp overlap

TEAD4 1 dataset

ChIP ESC S26-ESC-d0-TEAD4-exp1 267 bp overlap

TP53 6 datasets

Motif ES_0h ES_0h-TP53_MA0106.3 18 bp overlap

ChIP H9 GSE142050.TP53.H9 100 bp overlap

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 169 bp overlap

ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 88 bp overlap

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 206 bp overlap

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 281 bp overlap

TP63 9 datasets

ChIP BxPC-3 GSE115461.TP63.BxPC-3 59 bp overlap

Motif ES_0h ES_0h-TP63_MA0525.2 18 bp overlap

ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 189 bp overlap

ChIP keratinocyte GSE56674.TP63.keratinocyte 105 bp overlap

ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 143 bp overlap

ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 192 bp overlap

ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 139 bp overlap

ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 136 bp overlap

ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 166 bp overlap

TP73 1 dataset

Motif ES_0h ES_0h-TP73_MA0861.2 16 bp overlap

TWIST1 1 dataset

Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 122 bp overlap

ZNF281 1 dataset

ChIP WTC11 ENCFF551GAV 295 bp overlap

ZNF416 1 dataset

Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap

ZNF528 1 dataset

Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap

Genome Browser