chr2 : 229,486,428 229,486,971
543 bp 55 TFs 0 linked genes
This 543 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:229,481,428 – 229,491,971
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 403 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 219 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 192 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 203 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MEF2B 2 datasets
ChIP tonsil GSE110682.MEF2B.tonsil 57 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 324 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 339 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 181 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 225 bp overlap
ChIP hESC GSE18292.NANOG.hESC 149 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 173 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU5F1 6 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 375 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 256 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 119 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 339 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 285 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 219 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 222 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 256 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 102 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 251 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 293 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 134 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 375 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 154 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 75 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap