chr2 : 222,294,064 – 222,294,609
545 bp 40 TFs 1 linked gene
This 545 bp open chromatin element is linked to PAX3 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PAX3 4.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:222,289,064 – 222,299,609
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 152 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 272 bp overlap
BICRA 1 dataset
ChIP Mel270 GSE124720.BICRA.Mel270 205 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 545 bp overlap
BRD2 2 datasets
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 257 bp overlap
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 205 bp overlap
BRD4 5 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 420 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 176 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 409 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 283 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 310 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 418 bp overlap
ChIP H1 ENCFF095JHA 485 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 260 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 147 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 545 bp overlap
ChIP H1 ENCFF329MAX 382 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 545 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 173 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 82 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 304 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ETS1 3 datasets
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 220 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 186 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 240 bp overlap
EZH2 29 datasets
ChIP GM23248 ENCFF506FWX 445 bp overlap
ChIP GM23338 ENCFF613YON 545 bp overlap
ChIP GM23338 ENCFF886DXX 359 bp overlap
ChIP H1 ENCFF232NZA 545 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 545 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 470 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 545 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 545 bp overlap
ChIP HepG2 ENCFF912EIW 519 bp overlap
ChIP HepG2 ENCFF912EIW 529 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 545 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 345 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 545 bp overlap
ChIP astrocyte ENCFF365JTP 509 bp overlap
ChIP astrocyte ENCFF365JTP 539 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 427 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 410 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 545 bp overlap
ChIP fibroblast of lung ENCFF479BAW 471 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 545 bp overlap
ChIP hepatocyte ENCFF118DKH 338 bp overlap
ChIP hepatocyte ENCFF552DZB 545 bp overlap
ChIP keratinocyte ENCFF070STK 528 bp overlap
ChIP keratinocyte ENCFF070STK 429 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 228 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 395 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 545 bp overlap
ChIP neural progenitor cell ENCFF472NFV 545 bp overlap
EZH2_phosphoT487 1 dataset
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 403 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 293 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 419 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 334 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 185 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 545 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 541 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 545 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 279 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 235 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 545 bp overlap
OGT 1 dataset
ChIP PC-3_OSMI-2 GSE112667.OGT.PC-3_OSMI-2 288 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 446 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 91 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 146 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 187 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 532 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 210 bp overlap
RAD21 1 dataset
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 82 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 221 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 545 bp overlap
SMARCA4 1 dataset
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 417 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 545 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 278 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP H1 ENCFF263FUH 276 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 250 bp overlap
SUZ12 12 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 545 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 313 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 318 bp overlap
ChIP H1 ENCFF507HGF 185 bp overlap
ChIP H1 ENCFF881NFR 545 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 545 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 517 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 342 bp overlap
ChIP NT2/D1 ENCFF574SXS 545 bp overlap
ChIP NT2/D1 ENCFF574SXS 162 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 545 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 545 bp overlap
TCF12 3 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 56 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 141 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 253 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 521 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 335 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 197 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 333 bp overlap
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