chr2 : 185,215,337 185,215,772
435 bp 50 TFs 0 linked genes
This 435 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:185,210,337 – 185,220,772
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
ARID3A 2 datasets
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 102 bp overlap
ChIP HepG2 ENCFF122GLS 248 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 417 bp overlap
BRD2 1 dataset
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 106 bp overlap
BRD4 1 dataset
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 148 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 318 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 255 bp overlap
CTCF 165 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 212 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 224 bp overlap
ChIP C4-2B ENCFF821XVN 435 bp overlap
ChIP C4-2B ENCFF821XVN 257 bp overlap
ChIP Caco-2 ENCFF934QYS 181 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 143 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 177 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 94 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 220 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 435 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 217 bp overlap
ChIP GM06990 ENCFF471OQT 200 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 163 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 191 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 177 bp overlap
ChIP GM12801 ENCSR000DQY.CTCF.GM12801 112 bp overlap
ChIP GM12864 ENCFF357DQE 186 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 147 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 111 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 151 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 186 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 165 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 154 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 144 bp overlap
ChIP GM12872 ENCFF697BYI 223 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 176 bp overlap
ChIP GM12873 ENCFF711LOS 205 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 179 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 172 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 118 bp overlap
ChIP GM12878 ENCFF635MMB 153 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 139 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 106 bp overlap
ChIP GM23338 ENCFF531QOI 205 bp overlap
ChIP GM23338 ENCFF531QOI 83 bp overlap
ChIP GM23338 ENCFF772DML 174 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 164 bp overlap
ChIP H1 ENCFF764RHO 113 bp overlap
ChIP H54 ENCFF255TVO 173 bp overlap
ChIP H9 ENCFF152GTF 189 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 150 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 116 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 218 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 115 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 252 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 193 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 270 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 187 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 248 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 134 bp overlap
ChIP HCT116 ENCFF003KHP 308 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 97 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 103 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 328 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 118 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 145 bp overlap
ChIP HEK293 ENCFF498RMM 211 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 132 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 113 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 170 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 156 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 204 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 191 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 163 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 136 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 94 bp overlap
ChIP HepG2 ENCFF127KUP 216 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 244 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 162 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 61 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 199 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 196 bp overlap
ChIP KMS-11 ENCFF853JKX 217 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 147 bp overlap
ChIP KMS-11_NSD2-Low GSE131651.CTCF.KMS-11_NSD2-Low 199 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 281 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 167 bp overlap
ChIP MCF-7 ENCFF139NQI 196 bp overlap
ChIP MCF-7 ENCFF198DQX 203 bp overlap
ChIP MCF-7 ENCFF414SZG 178 bp overlap
ChIP MCF-7 ENCFF494VXA 203 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 198 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 177 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 144 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 155 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 109 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 98 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 187 bp overlap
ChIP MM.1S ENCFF869JMQ 179 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 337 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 200 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 409 bp overlap
ChIP OCI-LY1 ENCFF455ESK 287 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 306 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 307 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 223 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 222 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 185 bp overlap
ChIP PC-3 ENCFF487TUI 335 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 293 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 116 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 149 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 132 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 350 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 150 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 204 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 198 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 190 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 199 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 199 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 98 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 195 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 189 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 194 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 151 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 176 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 214 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 219 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 180 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 200 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 163 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 158 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 95 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 235 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 183 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 231 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 273 bp overlap
ChIP endodermal cell ENCFF471YCZ 183 bp overlap
ChIP endodermal cell ENCFF471YCZ 90 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 179 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 218 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 168 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 160 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 246 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 177 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 151 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 181 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 197 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 220 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 203 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 141 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 185 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 137 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 141 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 221 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 217 bp overlap
ChIP lymphoblast GSE155324.CTCF.lymphoblast 216 bp overlap
ChIP neural progenitor cell ENCFF420RBO 163 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 259 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 96 bp overlap
ChIP placenta ENCFF029PHY 300 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 148 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 166 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 317 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 99 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 234 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 161 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 136 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 171 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 160 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 169 bp overlap
ESRRA 1 dataset
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
ESRRB 1 dataset
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Esrrg 1 dataset
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 138 bp overlap
ChIP HepG2 ENCFF740VZW 152 bp overlap
FOXA2 1 dataset
ChIP HepG2 ENCFF533COJ 167 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 154 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 239 bp overlap
HNF4A 3 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 160 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 62 bp overlap
ChIP HepG2 ENCFF146SSF 224 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
MED1 2 datasets
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 192 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
NFKB1 1 dataset
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 194 bp overlap
ChIP H1 ENCFF967OJF 189 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 147 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 152 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 102 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 164 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 144 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 147 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 138 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 194 bp overlap
SOX15 1 dataset
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 142 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 151 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap