chr1 : 5,119,295 – 5,119,824
529 bp 60 TFs 0 linked genes
This 529 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:5,114,295 – 5,124,824
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 184 bp overlap
ARNT::HIF1A 6 datasets
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 260 bp overlap
BARX2 3 datasets
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 76 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 217 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 172 bp overlap
CREB3L4 3 datasets
Motif DE_36h DE_36h-CREB3L4_MA1474.2 10 bp overlap
Motif DE_48h DE_48h-CREB3L4_MA1474.2 10 bp overlap
Motif DE_72h DE_72h-CREB3L4_MA1474.2 10 bp overlap
CTCF 307 datasets
ChIP 22Rv1 ENCFF466OXN 452 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 340 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 374 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 326 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 383 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 316 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 225 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 193 bp overlap
ChIP A549 ENCFF034FVO 313 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 162 bp overlap
ChIP C4-2B ENCFF821XVN 355 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 186 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_72h DE_72h-CTCF_MA0139.2 15 bp overlap
Motif DE_72h DE_72h-CTCF_MA1929.2 31 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 146 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 188 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 211 bp overlap
ChIP GM12864 ENCFF357DQE 251 bp overlap
ChIP GM12865 ENCFF067GFI 213 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 171 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12873 ENCFF711LOS 285 bp overlap
ChIP GM23338 ENCFF832KWE 423 bp overlap
ChIP GM23338 ENCFF832KWE 218 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 350 bp overlap
ChIP H1 ENCFF230QSV 83 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 181 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 327 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 270 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 251 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 271 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 298 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 261 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 229 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 264 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 268 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 324 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 277 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 280 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 262 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 297 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 65 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 120 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 90 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 188 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 294 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 111 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 249 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 154 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 261 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 153 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 153 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 154 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 88 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 283 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 158 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 295 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 288 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 283 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 267 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 252 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 135 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 121 bp overlap
ChIP HepG2 ENCFF127KUP 226 bp overlap
ChIP HepG2 ENCFF194VBQ 311 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 294 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 92 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 291 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 234 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 189 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 141 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 111 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 261 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 134 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 116 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 125 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 153 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 162 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 173 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 173 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 185 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 138 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 126 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 172 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 142 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 253 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP K562 ENCFF430KTH 329 bp overlap
ChIP K562 ENCFF598YSU 252 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 152 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 193 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 249 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 203 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 125 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 160 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 153 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 435 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 274 bp overlap
ChIP MCF-7 ENCFF139NQI 277 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 226 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 148 bp overlap
ChIP MCF-7 ENCFF494VXA 226 bp overlap
ChIP MCF-7 ENCFF844STM 146 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 301 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 264 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 165 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 161 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 215 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 179 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 110 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 134 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 283 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 271 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 257 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 299 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 139 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 111 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 288 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 260 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 133 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 257 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 146 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 201 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 186 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 351 bp overlap
ChIP NPC GSE115407.CTCF.NPC 279 bp overlap
ChIP PC-3 ENCFF487TUI 361 bp overlap
ChIP PC-3 ENCFF487TUI 161 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 368 bp overlap
ChIP PC-9 ENCFF539ULB 372 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 127 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 225 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 116 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 448 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 110 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 245 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 222 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 267 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 250 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 173 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 202 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 275 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 282 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 238 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 246 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 192 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 205 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 195 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 364 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 169 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 166 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 300 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 233 bp overlap
ChIP adrenal gland ENCFF257AUK 224 bp overlap
ChIP adrenal gland ENCFF282ZUL 100 bp overlap
ChIP adrenal gland ENCFF596QXB 216 bp overlap
ChIP adrenal gland ENCFF678WUB 194 bp overlap
ChIP adrenal gland ENCFF723HUU 323 bp overlap
ChIP adrenal gland ENCFF886WNR 279 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 360 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 315 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 305 bp overlap
ChIP adrenal-gland ENCSR408ZEE.CTCF.adrenal-gland 292 bp overlap
ChIP adrenal-gland ENCSR014GSQ.CTCF.adrenal-gland 274 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 214 bp overlap
ChIP body of pancreas ENCFF269EDN 336 bp overlap
ChIP body of pancreas ENCFF438KTE 339 bp overlap
ChIP body of pancreas ENCFF798MEO 171 bp overlap
ChIP brain ENCFF067KUH 367 bp overlap
ChIP brain ENCFF163BBN 184 bp overlap
ChIP brain ENCFF685VRG 234 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 323 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 280 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 224 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 241 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 209 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 131 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 215 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 378 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 335 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 382 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 356 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 421 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 353 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 374 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 110 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF562MJV 351 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF604JAV 313 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 350 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 376 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 341 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 398 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 359 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 383 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF851XUX 358 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 384 bp overlap
ChIP endodermal cell ENCFF471YCZ 315 bp overlap
ChIP endodermal cell ENCFF471YCZ 135 bp overlap
ChIP endothelial cell ENCFF663LIE 426 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 192 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 340 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 278 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 271 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 209 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 229 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 210 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 495 bp overlap
ChIP hESC GSE20650.CTCF.hESC 163 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 249 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 437 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 290 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 529 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 426 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 173 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 287 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 255 bp overlap
ChIP heart left ventricle ENCFF354HOQ 305 bp overlap
ChIP heart left ventricle ENCFF548XHH 300 bp overlap
ChIP hepatocyte ENCFF263BLJ 277 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 258 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 269 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 196 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 223 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 221 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 210 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 210 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 136 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 244 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 262 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 244 bp overlap
ChIP islet ERP004003.CTCF.islet 270 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 197 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 266 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 263 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 340 bp overlap
ChIP liver ENCFF895ERR 245 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 206 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 204 bp overlap
ChIP nephron ENCFF411ACD 350 bp overlap
ChIP nephron ENCFF589HXU 392 bp overlap
ChIP nephron ENCFF972IQB 363 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 365 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 387 bp overlap
ChIP neural cell ENCFF335ADI 334 bp overlap
ChIP neural crest cell ENCFF182LWK 304 bp overlap
ChIP neural progenitor cell ENCFF420RBO 315 bp overlap
ChIP neural progenitor cell ENCFF581WPG 215 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 496 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 257 bp overlap
ChIP pancreas ENCFF372XNU 319 bp overlap
ChIP pancreas ENCSR687APM.CTCF.pancreas 279 bp overlap
ChIP pancreas ENCSR585KBH.CTCF.pancreas 262 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 112 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 254 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 291 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 287 bp overlap
ChIP pancreas_body ENCSR572DUJ.CTCF.pancreas_body 225 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 147 bp overlap
ChIP parathyroid adenoma ENCFF173CEN 300 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 344 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 237 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 288 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 273 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 293 bp overlap
ChIP prostate ENCSR946MNG.CTCF.prostate 225 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 160 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 331 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 323 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 218 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 218 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 296 bp overlap
ChIP right atrium auricular region ENCFF696NTN 352 bp overlap
ChIP sigmoid-colon ENCSR857RJQ.CTCF.sigmoid-colon 246 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 257 bp overlap
ChIP smooth muscle cell ENCFF656FBT 297 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 281 bp overlap
ChIP spleen ENCFF065CBS 389 bp overlap
ChIP spleen ENCFF954DQD 356 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 274 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 174 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 219 bp overlap
ChIP stomach ENCSR361KVZ.CTCF.stomach 131 bp overlap
ChIP testis ENCFF409BGH 279 bp overlap
ChIP testis ENCFF919VBQ 349 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 318 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 227 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 273 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 223 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 345 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 302 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 187 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 220 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 179 bp overlap
ESR1 9 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 199 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 224 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 199 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 215 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 219 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 232 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 191 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 205 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 212 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 221 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 275 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 314 bp overlap
ChIP DE DE-FOXA2-1 63 bp overlap
ChIP DE DE-FOXA2-2 454 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 267 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 329 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 441 bp overlap
ChIP DE DE-GATA4-2 529 bp overlap
ChIP foregut GSE117136.GATA4.foregut 396 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 489 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 420 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 395 bp overlap
ChIP DE DE-GATA6-2 529 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 355 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 444 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 362 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 433 bp overlap
ChIP foregut GSE117136.GATA6.foregut 440 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 439 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 416 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 382 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 274 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 398 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 226 bp overlap
KLF9 4 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
Motif DE_72h DE_72h-KLF9_MA1107.3 11 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 304 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 188 bp overlap
MYC 1 dataset
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 75 bp overlap
MYCN 1 dataset
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 207 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 449 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 168 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 440 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 297 bp overlap
ChIP hESC GSE18292.NANOG.hESC 123 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 56 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 390 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 147 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 407 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 362 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 506 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 199 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 529 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 529 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 488 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 487 bp overlap
PPARG 3 datasets
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
Motif DE_48h DE_48h-PPARG_MA0066.2 19 bp overlap
Motif DE_72h DE_72h-PPARG_MA0066.2 19 bp overlap
RAD21 35 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 138 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 262 bp overlap
ChIP H1 ENCFF698EWO 165 bp overlap
ChIP H1 ENCFF967OJF 78 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 221 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 161 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 80 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 162 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 181 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 146 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 206 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 118 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 134 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP MCF-7 ENCFF724VCQ 257 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 193 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 189 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 151 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 191 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 161 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 394 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 214 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 181 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 293 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 376 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 146 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 158 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 308 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 277 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 256 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 232 bp overlap
ChIP liver ENCFF522JHE 331 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 441 bp overlap
ChIP neural cell ENCFF564MOT 414 bp overlap
RBPJ 3 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 132 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 529 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 343 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 114 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 334 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 184 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 181 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 291 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 240 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 260 bp overlap
SMC1A 3 datasets
ChIP A-549 GSE76893.SMC1A.A-549 137 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 155 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 142 bp overlap
SMC3 5 datasets
ChIP GP5D GSE51234.SMC3.GP5D 222 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 249 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 230 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 516 bp overlap
ChIP neural cell ENCFF795YGY 382 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 433 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 317 bp overlap
STAG1 5 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 203 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF843EBZ 296 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 188 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 122 bp overlap
THAP1 1 dataset
Motif DE_72h DE_72h-THAP1_MA0597.3 8 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 295 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 298 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 182 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 135 bp overlap
ZNF382 2 datasets
Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap
Motif DE_72h DE_72h-ZNF382_MA1594.1 24 bp overlap
ZNF610 2 datasets
Motif DE_48h DE_48h-ZNF610_MA1713.2 10 bp overlap
Motif DE_72h DE_72h-ZNF610_MA1713.2 10 bp overlap
ZNF708 5 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
Motif DE_72h DE_72h-ZNF708_MA1730.2 9 bp overlap
ZNF768 3 datasets
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
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