chr2 : 105,489,427 105,490,223
796 bp 50 TFs 0 linked genes
This 796 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:105,484,427 – 105,495,223
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP liver ENCSR480LIS.ATF3.liver 51 bp overlap
Arid3b 1 dataset
Motif DE_60h DE_60h-Arid3b_MA0601.2 7 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 219 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 176 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 142 bp overlap
ESR1 1 dataset
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 245 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 389 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 365 bp overlap
FOXA1 12 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 162 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 112 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 200 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 174 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 205 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 181 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 254 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 223 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 149 bp overlap
ChIP liver ENCFF537QZV 106 bp overlap
ChIP liver ENCFF749ERP 52 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 173 bp overlap
FOXA2 7 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 287 bp overlap
ChIP DE DE-FOXA2-1 787 bp overlap
ChIP DE DE-FOXA2-2 796 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 76 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 86 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 161 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 201 bp overlap
FOXL2 2 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 164 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 245 bp overlap
GATA4 9 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 70 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 287 bp overlap
ChIP DE DE-GATA4-1 796 bp overlap
ChIP DE DE-GATA4-2 796 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 307 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 228 bp overlap
ChIP foregut GSE117136.GATA4.foregut 489 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 796 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 658 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 796 bp overlap
ChIP DE DE-GATA6-2 790 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 306 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 442 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 373 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 796 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 471 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 390 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 197 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 183 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 796 bp overlap
ChIP foregut GSE117136.GATA6.foregut 514 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 314 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 718 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 437 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF449HPV 146 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 193 bp overlap
JUND 1 dataset
ChIP liver ENCFF007WWT 54 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 258 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 353 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 222 bp overlap
MAF 1 dataset
Motif DE_60h DE_60h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_60h DE_60h-MAFA_MA1521.2 13 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_GRKD_TA_TNFA GSE24518.NR3C1.HeLa-B2_GRKD_TA_TNFA 98 bp overlap
ONECUT1 2 datasets
ChIP liver ERP002306.ONECUT1.liver 53 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 396 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 294 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 226 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 351 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 243 bp overlap
PPARG 3 datasets
Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 144 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 131 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 155 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REST 3 datasets
ChIP liver ENCFF240FWT 98 bp overlap
ChIP liver ENCSR893QWP.REST.liver 95 bp overlap
ChIP liver ENCSR867WPH.REST.liver 86 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 152 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 233 bp overlap
SMAD2 1 dataset
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 760 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 139 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 158 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 183 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 190 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 128 bp overlap
ZBTB6 1 dataset
Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 60 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 296 bp overlap
ZNF26 1 dataset
ChIP HEK293T GSE78099.ZNF26.HEK293T 286 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 52 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 96 bp overlap
ZNF512 5 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 324 bp overlap
ChIP K562 ENCFF455WDH 124 bp overlap
ChIP K562 ENCFF455WDH 326 bp overlap
ChIP K562 ENCFF601EMZ 111 bp overlap
ChIP WTC11 ENCFF086TTM 191 bp overlap
ZSCAN4 1 dataset
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap