chr2 : 44,939,777 44,940,009
232 bp 43 TFs 7 linked genes
This 232 bp open chromatin element is linked to 7 target genes and is bound by 43 transcription factors.
Linked Genes
7 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000274547 945 bp At TSS Proximity
SIX3-AS1 1.5 kb Proximal Proximity
SIX3 1.7 kb Proximal Proximity
ENSG00000276048 2.4 kb Proximal Proximity
LINC01833 4.0 kb Proximal Proximity
ENSG00000277809 4.2 kb Proximal Proximity
ENSG00000276229 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:44,934,777 – 44,945,009
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 204 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 232 bp overlap
BRD4 3 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 91 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 195 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 160 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 90 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 57 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 232 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 159 bp overlap
CTBP2 1 dataset
ChIP H1 ENCFF329MAX 232 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 226 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 232 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 181 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 220 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 231 bp overlap
EZH2 18 datasets
ChIP GM23338 ENCFF613YON 107 bp overlap
ChIP GM23338 ENCFF613YON 201 bp overlap
ChIP GM23338 ENCFF886DXX 232 bp overlap
ChIP H1 ENCFF232NZA 232 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 232 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 113 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 148 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 155 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 88 bp overlap
ChIP astrocyte ENCFF365JTP 232 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 202 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 232 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 109 bp overlap
ChIP fibroblast of lung ENCFF479BAW 189 bp overlap
ChIP fibroblast of lung ENCFF479BAW 232 bp overlap
ChIP hepatocyte ENCFF552DZB 232 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 168 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 184 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 148 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 50 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 232 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 113 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 210 bp overlap
JUN 4 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 232 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 232 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 52 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 138 bp overlap
KDM5B 2 datasets
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 148 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 147 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 232 bp overlap
MED26 1 dataset
ChIP HCT-116 GSE121355.MED26.HCT-116 63 bp overlap
PCGF2 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 74 bp overlap
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 232 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 232 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 232 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 232 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 116 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 232 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 232 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 200 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 151 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 200 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 93 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR513XQX.SIN3A.A-549 133 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 232 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 184 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 118 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 53 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 232 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 202 bp overlap
ChIP NCI-H1703 GSE121755.SMARCA4.NCI-H1703 213 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 90 bp overlap
SUZ12 8 datasets
ChIP H1 ENCFF881NFR 232 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 58 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 83 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 97 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 67 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 205 bp overlap
ChIP NT2/D1 ENCFF574SXS 232 bp overlap
ChIP NT2/D1 ENCFF574SXS 73 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 183 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 192 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 173 bp overlap
ChIP U2OS GSE96776.ZBTB48.U2OS 232 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 232 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 213 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 111 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 152 bp overlap