chr2 : 40,130,386 40,130,549
163 bp 45 TFs 0 linked genes
This 163 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:40,125,386 – 40,135,549
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ATF2 6 datasets
ChIP GM12878 ENCFF066HPG 163 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 147 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 163 bp overlap
ChIP HepG2 ENCFF955VER 160 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 163 bp overlap
ChIP K562 ENCFF139ZZG 163 bp overlap
ATF7 3 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 162 bp overlap
ChIP HepG2 ENCFF470FKK 91 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 163 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 163 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 91 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 163 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
BRD4 2 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 144 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 163 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 163 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 163 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
ESRRG 3 datasets
ChIP SK-N-SH ENCFF394HLU 154 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 149 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 163 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 163 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCFF764OZD 163 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 163 bp overlap
GATA4 9 datasets
ChIP G296S GSE85628.GATA4.G296S 163 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 163 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 163 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 163 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 163 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 163 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 163 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 163 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 163 bp overlap
GATA6 2 datasets
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 163 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 163 bp overlap
GLIS3 2 datasets
ChIP SK-N-SH ENCFF370MHZ 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 163 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 152 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 163 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 163 bp overlap
ChIP SK-N-SH ENCFF285GEQ 163 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCFF971JKN 138 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 163 bp overlap
MED1 4 datasets
ChIP G296S GSE85628.MED1.G296S 139 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 139 bp overlap
ChIP RH4 GSE83726.MED1.RH4 139 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 157 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 57 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 132 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 144 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 163 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 106 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 163 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 163 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 163 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 163 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 163 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF725QFT 163 bp overlap
POU6F1 1 dataset
ChIP SK-N-SH ENCFF834EMP 163 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 163 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 125 bp overlap
REST 5 datasets
ChIP liver ENCFF240FWT 163 bp overlap
ChIP liver ENCFF577AZT 163 bp overlap
ChIP liver ENCSR893QWP.REST.liver 147 bp overlap
ChIP liver ENCSR867WPH.REST.liver 124 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 163 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 163 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 163 bp overlap
SMARCA4 3 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 112 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 163 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 163 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 147 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 163 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 163 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 154 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 163 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 163 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 163 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 163 bp overlap
ZFP30 1 dataset
ChIP SK-N-SH ENCFF375XBD 163 bp overlap
ZNF565 1 dataset
ChIP SK-N-SH ENCFF372UGG 163 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 163 bp overlap