Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

AFF4 1 dataset

ChIP MCF-7 GSE144036.AFF4.MCF-7 515 bp overlap

AGO1 2 datasets

ChIP Hep-G2 GSE120104.AGO1.Hep-G2 123 bp overlap

ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 106 bp overlap

ATF2 1 dataset

Motif DE_36h DE_36h-ATF2_MA1632.2 10 bp overlap

BCL11A 1 dataset

ChIP MDA-MB-157 ERP003925.BCL11A.MDA-MB-157 239 bp overlap

BRD3 1 dataset

ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 215 bp overlap

BRD4 8 datasets

ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 442 bp overlap

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 213 bp overlap

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 289 bp overlap

ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 500 bp overlap

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 232 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 175 bp overlap

ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 788 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 415 bp overlap

CDX2 1 dataset

ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 57 bp overlap

CREB1 1 dataset

Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap

CREM 1 dataset

Motif DE_36h DE_36h-CREM_MA0609.3 10 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 251 bp overlap

ChIP BLaER1 ENCFF364PUR 428 bp overlap

DNMT3B 1 dataset

ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 247 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 139 bp overlap

E4F1 1 dataset

ChIP GM12878 ENCSR439WAF.E4F1.GM12878 252 bp overlap

EGR1 1 dataset

ChIP A-375 GSE116190.EGR1.A-375 342 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 178 bp overlap

ELF1 1 dataset

Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap

EP300 1 dataset

ChIP tibial nerve ENCFF346AYA 364 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 183 bp overlap

FOXP2 1 dataset

ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 96 bp overlap

GATA1 1 dataset

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 175 bp overlap

GATA4 1 dataset

ChIP foregut GSE117136.GATA4.foregut 258 bp overlap

GATA6 11 datasets

ChIP AGS GSE51705.GATA6.AGS 150 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 526 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 535 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 561 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 393 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 610 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 601 bp overlap

ChIP PATU8988 GSE47535.GATA6.PATU8988 369 bp overlap

ChIP YCC-3 GSE51705.GATA6.YCC-3 216 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 339 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 283 bp overlap

HIF1A 1 dataset

ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 288 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 180 bp overlap

HNF4A 2 datasets

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 189 bp overlap

ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 81 bp overlap

Ikzf3 1 dataset

Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap

JUN 1 dataset

Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap

JUND 1 dataset

Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap

KLF1 3 datasets

ChIP HEK293 ENCFF159QSW 377 bp overlap

ChIP HEK293 ENCSR859BMR.KLF1.HEK293 445 bp overlap

ChIP HEK293 GSE76494.KLF1.HEK293 307 bp overlap

KLF17 1 dataset

ChIP HEK293 ENCSR065WUF.KLF17.HEK293 341 bp overlap

KLF5 1 dataset

ChIP HEK293 GSE88976.KLF5.HEK293 198 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 105 bp overlap

NELFE 2 datasets

ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 241 bp overlap

NFKB1 1 dataset

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 301 bp overlap

NR2C1 1 dataset

Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap

PCBP1 2 datasets

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 529 bp overlap

ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 306 bp overlap

PLAG1 2 datasets

ChIP K-562 GSE111469.PLAG1.K-562 127 bp overlap

ChIP K-562 GSE111469.PLAG1.K-562 293 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 400 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 301 bp overlap

PTBP1 2 datasets

ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 63 bp overlap

ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 207 bp overlap

RBM39 2 datasets

ChIP Hep-G2 GSE120104.RBM39.Hep-G2 261 bp overlap

ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 217 bp overlap

RFX1 1 dataset

ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 157 bp overlap

SMAD2-3 3 datasets

ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 518 bp overlap

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 681 bp overlap

SMAD4 1 dataset

ChIP Caco-2 GSE112946.SMAD4.Caco-2 370 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 324 bp overlap

TRIM28 1 dataset

ChIP AF22 GSE84259.TRIM28.AF22 280 bp overlap

USF1 1 dataset

ChIP HepG2 ENCFF807KYJ 201 bp overlap

YY1 2 datasets

ChIP Huh-7 GSE97411.YY1.Huh-7 368 bp overlap

ChIP K-562 ENCSR000BMH.YY1.K-562 145 bp overlap

ZBTB20 1 dataset

ChIP HepG2 ENCFF200JRV 88 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 308 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 244 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 779 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 265 bp overlap

ZNF711 1 dataset

ChIP HEK293T GSE145160.ZNF711.HEK293T 65 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Genome Browser