chrX : 100,812,314 – 100,813,077
763 bp 75 TFs 1 linked gene
This 763 bp open chromatin element is linked to CSTF2 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CSTF2 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:100,807,314 – 100,818,077
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_36h DE_36h-AhrArnt_MA0006.2 5 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BACH1 1 dataset
ChIP AsPC-1 GSE124406.BACH1.AsPC-1 186 bp overlap
BCL11A 1 dataset
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
BRD4 2 datasets
ChIP HCC1937 GSE124748.BRD4.HCC1937 328 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 404 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_36h DE_36h-Bhlha15_MA1472.3 8 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 388 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF335XTP 261 bp overlap
ChIP BLaER1 ENCFF844FIP 298 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 439 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 394 bp overlap
Esrrg 1 dataset
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
FOXA1 3 datasets
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 106 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 70 bp overlap
ChIP prostate_tumor_tissue3 GSE114385.FOXA1.prostate_tumor_tissue3 187 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 324 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 334 bp overlap
ChIP DE DE-GATA4-2 694 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 470 bp overlap
ChIP DE DE-GATA6-2 525 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 326 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 417 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 716 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 725 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 364 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 351 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 474 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 114 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 629 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 627 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif DE_36h DE_36h-KLF11_MA1512.2 10 bp overlap
MAFG 1 dataset
ChIP K562 ENCFF455EEO 409 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 329 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 82 bp overlap
NEUROD1 2 datasets
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NFE2 2 datasets
ChIP K562 ENCFF047YKA 189 bp overlap
ChIP K562 ENCFF163BSI 265 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Neurod2 4 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
POLR2A 1 dataset
ChIP transverse colon ENCFF610RWV 425 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 492 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 480 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 495 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
RARB 2 datasets
Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap
Motif DE_36h DE_36h-RARB_MA1552.2 13 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 446 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 449 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 581 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 501 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 214 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 371 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 296 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 195 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 309 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 512 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP9 2 datasets
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
Motif DE_36h DE_36h-SP9_MA1564.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 361 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 296 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB18 2 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
ZNF143 1 dataset
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 390 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 137 bp overlap
ZNF652 2 datasets
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
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