chrX : 33,855,287 – 33,855,657

370 bp 71 TFs 0 linked genes

This 370 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

71 transcription factors

Arid5a 1 dataset

Motif DE_12h DE_12h-Arid5a_MA0602.2 8 bp overlap

BCL11A 2 datasets

ChIP WA01 ENCSR000BIP.BCL11A.WA01 166 bp overlap

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 129 bp overlap

CEBPA 1 dataset

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

CEBPB 3 datasets

Motif DE_12h DE_12h-CEBPB_MA0466.4 10 bp overlap

ChIP H1 ENCFF871PTR 261 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 223 bp overlap

CEBPD 1 dataset

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA0838.1 10 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 219 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

EBF1 2 datasets

Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap

EBF3 1 dataset

Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap

ELF3 1 dataset

ChIP PDAC GSE64557.ELF3.PDAC 245 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 151 bp overlap

ERF::FOXI1 1 dataset

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::FOXO1 1 dataset

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

ERF::HOXB13 1 dataset

Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap

ETS1 1 dataset

ChIP hESC ENCSR534VHI.ETS1.hESC 116 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap

Ebf2 1 dataset

Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap

Ebf4 1 dataset

Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 1 dataset

Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

Hmga1 1 dataset

Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Irf1 2 datasets

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap

KDM5B 1 dataset

ChIP HCC2157 GSE46055.KDM5B.HCC2157 135 bp overlap

MAF::NFE2 1 dataset

Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap

MEF2C 1 dataset

Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 231 bp overlap

MZF1 1 dataset

Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCFF065NZG 236 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 266 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 370 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 268 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 256 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 370 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 370 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 370 bp overlap

ChIP hESC GSE18292.NANOG.hESC 221 bp overlap

NIPBL 1 dataset

ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 297 bp overlap

Nfe2l2 1 dataset

Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap

POU4F1 1 dataset

Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap

POU4F2 1 dataset

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

POU4F3 1 dataset

Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 341 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 188 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 370 bp overlap

PRDM9 2 datasets

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Prdm14 1 dataset

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

SMARCA4 3 datasets

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 271 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 286 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 360 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 224 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 359 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 255 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 329 bp overlap

SOX12 2 datasets

Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap

Motif ES_0h ES_0h-SOX12_MA1561.2 10 bp overlap

SOX14 2 datasets

Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap

Motif ES_0h ES_0h-SOX14_MA1562.2 9 bp overlap

SOX18 2 datasets

Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap

Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 128 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 338 bp overlap

SOX21 2 datasets

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap

SOX9 2 datasets

Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap

Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 204 bp overlap

SRY 2 datasets

Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap

Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat2 2 datasets

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 293 bp overlap

TEAD1 2 datasets

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap

TEAD2 2 datasets

Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap

Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap

TEAD3 2 datasets

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap

TEAD4 3 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

TFAP2C 2 datasets

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 364 bp overlap

TFAP2E 1 dataset

Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap

VEZF1 1 dataset

Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZNF354A 2 datasets

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 241 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap