chr2 : 7,872,332 – 7,873,071

739 bp 71 TFs 1 linked gene

This 739 bp open chromatin element is linked to ENSG00000290092 and is bound by 71 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000290092		3.6 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

71 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 160 bp overlap

BCL6B 1 dataset

Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap

CDX2 1 dataset

Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 271 bp overlap

E2F8 1 dataset

Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap

EZH2 2 datasets

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 319 bp overlap

ChIP PC-9 ENCSR793USK.EZH2.PC-9 183 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 201 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXF2 1 dataset

Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

FOXK1 1 dataset

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxn1 1 dataset

Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

Foxq1 1 dataset

Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap

GATA2 1 dataset

Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 476 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 599 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 739 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 578 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 599 bp overlap

GLI3 1 dataset

Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap

GRHL2 1 dataset

Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap

Gli1 1 dataset

Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap

HOXB13 1 dataset

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

Hoxa13 1 dataset

Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 360 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 424 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 377 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 481 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 148 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 580 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 213 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 522 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 349 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 425 bp overlap

ChIP hESC GSE18292.NANOG.hESC 145 bp overlap

Nfat5 1 dataset

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 1 dataset

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

PBX3 1 dataset

Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap

POU5F1 4 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 394 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 258 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 366 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 158 bp overlap

PPARG 1 dataset

Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 396 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 385 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 336 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 424 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 505 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 343 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 192 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 352 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 215 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 337 bp overlap

SP4 1 dataset

ChIP WA01 ENCSR000BQV.SP4.WA01 163 bp overlap

TBP 1 dataset

Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 333 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TEAD4 1 dataset

ChIP ESC S26-ESC-d0-TEAD4-exp1 123 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 234 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZBTB7B 2 datasets

Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap

ZBTB7C 2 datasets

Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZFP42 1 dataset

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 357 bp overlap

ZNF157 1 dataset

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

ZNF16 1 dataset

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 286 bp overlap

ZNF341 1 dataset

Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap

ZNF354A 1 dataset

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

ZNF528 1 dataset

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

ZNF684 1 dataset

Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap

ZNF784 1 dataset

Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap