chr18 : 43,956,896 – 43,957,104
208 bp 44 TFs 0 linked genes
This 208 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:43,951,896 – 43,962,104
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP_F266S_shFOXA1_Ethanol GSE128883.AR.LNCaP_F266S_shFOXA1_Ethanol 171 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 136 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 185 bp overlap
ChIP LNCaP_M253K_shFOXA1_Ethanol GSE128883.AR.LNCaP_M253K_shFOXA1_Ethanol 188 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 176 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 208 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 204 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 126 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 184 bp overlap
ChIP H1 ENCFF955PMP 208 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 208 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 140 bp overlap
CTCF 307 datasets
ChIP 22Rv1 ENCFF466OXN 208 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 208 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 208 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 204 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 151 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 208 bp overlap
ChIP A673 ENCFF123WOM 208 bp overlap
ChIP AG04450 ENCFF116DJL 204 bp overlap
ChIP AG09319 ENCFF401ZTN 199 bp overlap
ChIP BE2C ENCFF757SRF 208 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 208 bp overlap
ChIP BJ ENCFF434HEC 208 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 157 bp overlap
ChIP C4-2B ENCFF821XVN 208 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 208 bp overlap
ChIP DND-41 ENCFF913MRA 208 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 142 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 208 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 135 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 195 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 208 bp overlap
ChIP GM06990 ENCFF471OQT 208 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 132 bp overlap
ChIP GM12864 ENCFF357DQE 208 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 139 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 110 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 139 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 138 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 141 bp overlap
ChIP GM23338 ENCFF531QOI 208 bp overlap
ChIP GM23338 ENCFF772DML 186 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 208 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 200 bp overlap
ChIP H1 ENCFF764RHO 182 bp overlap
ChIP H9 ENCFF152GTF 189 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 104 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 122 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 193 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 208 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 110 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 122 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 144 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 123 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 122 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 71 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 104 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 208 bp overlap
ChIP HEK293 ENCFF498RMM 100 bp overlap
ChIP HEK293 ENCFF821TIC 208 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 176 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 208 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 182 bp overlap
ChIP HFF-Myc ENCFF680WYR 208 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 208 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 208 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 208 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 131 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 186 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 179 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 193 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 115 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 92 bp overlap
ChIP IMR-90 GSE43070.CTCF.IMR-90 120 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 75 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 127 bp overlap
ChIP LNCAP ENCFF223HIG 151 bp overlap
ChIP LNCAP ENCFF700QXT 208 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 208 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 125 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 125 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 166 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 166 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 208 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 178 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 208 bp overlap
ChIP Loucy ENCFF359TVQ 208 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 208 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 204 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 115 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 208 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 208 bp overlap
ChIP MCF-7 ENCFF139NQI 206 bp overlap
ChIP MCF-7 ENCFF162GNE 205 bp overlap
ChIP MCF-7 ENCFF198DQX 192 bp overlap
ChIP MCF-7 ENCFF210JUZ 107 bp overlap
ChIP MCF-7 ENCFF414SZG 187 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 192 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 200 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 208 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 196 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 184 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 201 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 166 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 125 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 208 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 208 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 208 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 208 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 168 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 96 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 208 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 206 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 158 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 126 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 188 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 138 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 208 bp overlap
ChIP NPC GSE115407.CTCF.NPC 208 bp overlap
ChIP OCI-LY1 ENCFF455ESK 208 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 208 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 208 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 208 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 158 bp overlap
ChIP PC-3 ENCFF487TUI 208 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 208 bp overlap
ChIP PC-9 ENCFF539ULB 208 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 166 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 208 bp overlap
ChIP RWPE2 ENCFF911IEE 208 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 79 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 159 bp overlap
ChIP SK-N-SH ENCFF575DMG 192 bp overlap
ChIP SK-N-SH ENCFF731NJX 208 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 208 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 159 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 160 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 206 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 171 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 208 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 111 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 208 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 156 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 179 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 182 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 170 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 113 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 147 bp overlap
ChIP VCaP ENCFF858YQT 208 bp overlap
ChIP VCaP ENCFF858YQT 208 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 208 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 194 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 193 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 192 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 154 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 178 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 208 bp overlap
ChIP WA09 GSE105028.CTCF.WA09 176 bp overlap
ChIP WTC11 ENCFF658QVH 208 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 149 bp overlap
ChIP adrenal gland ENCFF678WUB 205 bp overlap
ChIP adrenal gland ENCFF886WNR 208 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 208 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 201 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 185 bp overlap
ChIP ascending aorta ENCFF451CCT 208 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 168 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 159 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 208 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 205 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 208 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 194 bp overlap
ChIP body of pancreas ENCFF269EDN 208 bp overlap
ChIP body of pancreas ENCFF438KTE 208 bp overlap
ChIP body of pancreas ENCFF798MEO 208 bp overlap
ChIP body of pancreas ENCFF881RGF 199 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 173 bp overlap
ChIP brain ENCFF163BBN 208 bp overlap
ChIP brain ENCFF685VRG 208 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 206 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 208 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 198 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 208 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 163 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 208 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 208 bp overlap
ChIP chondrocyte ENCFF134ORZ 205 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 208 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 176 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 208 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 208 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 208 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 208 bp overlap
ChIP endodermal cell ENCFF471YCZ 165 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 178 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 208 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 147 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 208 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 208 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 208 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 170 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 208 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 116 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 158 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 208 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 192 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 208 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 167 bp overlap
ChIP fibroblast of lung ENCFF084DUH 208 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 193 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 200 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 208 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 186 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 208 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 134 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 186 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 194 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 135 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 208 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 139 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 201 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 150 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 136 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 208 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 208 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 208 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 208 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 208 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 208 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 208 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 208 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 208 bp overlap
ChIP hESC GSE20650.CTCF.hESC 155 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 208 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 208 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 208 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 208 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 208 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 208 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 208 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 205 bp overlap
ChIP hepatocyte ENCFF263BLJ 187 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 208 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 127 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 208 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 208 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 208 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 152 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 192 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 199 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 208 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 176 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 173 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 189 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 208 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 208 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 208 bp overlap
ChIP islet GSE23784.CTCF.islet 208 bp overlap
ChIP islet ERP004003.CTCF.islet 208 bp overlap
ChIP keratinocyte ENCFF046PBT 113 bp overlap
ChIP keratinocyte ENCFF291YDC 100 bp overlap
ChIP keratinocyte ENCFF667ULX 208 bp overlap
ChIP keratinocyte ENCFF805QIE 208 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 208 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 208 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 204 bp overlap
ChIP kidney ENCFF335EKK 177 bp overlap
ChIP kidney ENCSR000DMC.CTCF.kidney 105 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 208 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 208 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 163 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 194 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 208 bp overlap
ChIP liver ENCFF895ERR 208 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 208 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 195 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 192 bp overlap
ChIP nephron ENCFF411ACD 208 bp overlap
ChIP nephron ENCFF589HXU 208 bp overlap
ChIP nerve_tibial ENCSR469POZ.CTCF.nerve_tibial 203 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 208 bp overlap
ChIP neural cell ENCFF335ADI 208 bp overlap
ChIP neural crest cell ENCFF182LWK 128 bp overlap
ChIP neural progenitor cell ENCFF420RBO 208 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 208 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 208 bp overlap
ChIP osteocyte ENCFF929FPD 156 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 208 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 175 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 208 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 138 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 206 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 199 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 120 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 155 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 208 bp overlap
ChIP prostate gland ENCFF655GBO 208 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 208 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 208 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 208 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 208 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 199 bp overlap
ChIP smooth muscle cell ENCFF656FBT 150 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 208 bp overlap
ChIP spleen ENCSR482PMN.CTCF.spleen 189 bp overlap
ChIP stomach ENCFF593FMT 208 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 186 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 172 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 148 bp overlap
ChIP uterus ENCFF466ZUR 208 bp overlap
ChIP uterus ENCSR684PGO.CTCF.uterus 134 bp overlap
ChIP uterus ENCSR392SFJ.CTCF.uterus 184 bp overlap
ELK1::HOXB13 1 dataset
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 208 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 208 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 208 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 208 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 208 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 208 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 208 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 208 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 208 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 208 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOSL1 2 datasets
ChIP H1 ENCFF920RFC 206 bp overlap
ChIP WA01 ENCSR000BNS.FOSL1.WA01 139 bp overlap
FOXA1 2 datasets
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 208 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 133 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 187 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 112 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 208 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 208 bp overlap
HOXD12::ELK1 1 dataset
Motif DE_12h DE_12h-HOXD12ELK1_MA1958.2 13 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 177 bp overlap
JARID2 1 dataset
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 156 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 138 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 139 bp overlap
OTX1 1 dataset
ChIP MCF-7 ENCFF645GYL 208 bp overlap
RAD21 44 datasets
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 156 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 208 bp overlap
ChIP H1 ENCFF698EWO 203 bp overlap
ChIP H1 ENCFF967OJF 199 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 208 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 182 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 156 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 119 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 208 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 208 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 208 bp overlap
ChIP Ishikawa ENCFF570JVV 208 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 190 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 100 bp overlap
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 208 bp overlap
ChIP MCF-7 ENCFF694KOM 208 bp overlap
ChIP MCF-7 ENCFF724VCQ 208 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 186 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 208 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 180 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 177 bp overlap
ChIP SK-N-SH ENCFF747MAS 204 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 202 bp overlap
ChIP SK-N-SH GSE76815.RAD21.SK-N-SH 187 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 208 bp overlap
ChIP THP-1 GSE55407.RAD21.THP-1 187 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 208 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 208 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 208 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 205 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 208 bp overlap
ChIP hiPSC_IB7 GSE106870.RAD21.hiPSC_IB7 208 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 208 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 208 bp overlap
ChIP hiPSC_IID12 GSE106870.RAD21.hiPSC_IID12 170 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 208 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 208 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 208 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 208 bp overlap
ChIP liver ENCFF522JHE 208 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 208 bp overlap
ChIP neural cell ENCFF564MOT 208 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP PFSK-1 ENCFF845VHA 205 bp overlap
RFX4 1 dataset
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 139 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 196 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 206 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 193 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 190 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 156 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 208 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE76893.SMC1A.MCF-7 159 bp overlap
SMC3 8 datasets
ChIP GP5D GSE51234.SMC3.GP5D 208 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 195 bp overlap
ChIP SK-N-SH ENCFF791WFB 206 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 161 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 208 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 208 bp overlap
ChIP neural cell ENCFF795YGY 159 bp overlap
ChIP neural cell ENCFF795YGY 166 bp overlap
STAG1 5 datasets
ChIP CHRF28811 ERP008568.STAG1.CHRF28811 199 bp overlap
ChIP HCAEC GSE101921.STAG1.HCAEC 182 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 204 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 208 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 132 bp overlap
STAG2 1 dataset
ChIP HL-60 GSE131577.STAG2.HL-60 135 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 173 bp overlap
VDR 2 datasets
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 167 bp overlap
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 208 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 149 bp overlap
ZBTB10 1 dataset
ChIP HEK293 ENCSR004PLU.ZBTB10.HEK293 169 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 208 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 149 bp overlap
ZNF865 2 datasets
ChIP HepG2 ENCFF472KAQ 208 bp overlap
ChIP HepG2 ENCFF472KAQ 119 bp overlap
ZSCAN4 3 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
ChIP HEK293 ENCFF381BKT 195 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 208 bp overlap
Huangfu Lab · Publications · Resources · Contact