chr2 : 447,080 447,664
584 bp 68 TFs 0 linked genes
This 584 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:442,080 – 452,664
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 89 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 575 bp overlap
BHLHE22 2 datasets
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
BRD4 8 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 235 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 281 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 220 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 168 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 546 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 279 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 261 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 195 bp overlap
Bhlha15 2 datasets
Motif DE_48h DE_48h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 303 bp overlap
CTCFL 2 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 174 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 202 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 247 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 218 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 424 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 154 bp overlap
ESR1 1 dataset
ChIP MCF-7_TAMR_E2 GSE86538.ESR1.MCF-7_TAMR_E2 113 bp overlap
EZH2 4 datasets
ChIP THP-1 GSE135024.EZH2.THP-1 236 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 197 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 275 bp overlap
ChIP neural progenitor cell ENCFF018MKA 332 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 194 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 229 bp overlap
FOXP1 1 dataset
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 200 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 366 bp overlap
ChIP DE DE-GATA4-2 465 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 335 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 523 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 288 bp overlap
ChIP DE DE-GATA6-2 444 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 302 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 465 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 375 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 463 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 321 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 333 bp overlap
HNF4A 1 dataset
ChIP hiPSC GSE104613.HNF4A.hiPSC 220 bp overlap
Hand1 1 dataset
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 413 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 469 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 276 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 110 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MSC 2 datasets
Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 412 bp overlap
MYF5 2 datasets
Motif DE_48h DE_48h-MYF5_MA1641.2 8 bp overlap
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
NEUROD1 2 datasets
Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
NHLH2 2 datasets
Motif DE_48h DE_48h-NHLH2_MA1529.2 16 bp overlap
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
NR1D1 1 dataset
Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap
NR3C1 2 datasets
ChIP NALM-6 GSE67046.NR3C1.NALM-6 152 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 356 bp overlap
Neurod2 4 datasets
Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 566 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 310 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 353 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 356 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 453 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF446ZGT 358 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 165 bp overlap
Ptf1A 2 datasets
Motif DE_48h DE_48h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RARA 4 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 264 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 411 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 467 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 366 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 477 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 228 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 198 bp overlap
SMAD2 1 dataset
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 364 bp overlap
SMARCA4 3 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 584 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 187 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 397 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 582 bp overlap
TAL1::TCF3 2 datasets
Motif DE_48h DE_48h-TAL1TCF3_MA0091.2 10 bp overlap
Motif DE_60h DE_60h-TAL1TCF3_MA0091.2 10 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 175 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 251 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 440 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 105 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 441 bp overlap
TFAP4 2 datasets
Motif DE_48h DE_48h-TFAP4_MA0691.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Tcf12 2 datasets
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Tcf21 2 datasets
Motif DE_48h DE_48h-Tcf21_MA0832.2 10 bp overlap
Motif DE_60h DE_60h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 155 bp overlap
ZNF582 2 datasets
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
ZNF708 1 dataset
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
ZNF816 1 dataset
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Zic2 2 datasets
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap