Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

38 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 145 bp overlap

BRD2 1 dataset

ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 203 bp overlap

BRD4 5 datasets

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 465 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 233 bp overlap

ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 448 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 168 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 245 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 311 bp overlap

CTCF 11 datasets

ChIP GM23338 ENCFF772DML 194 bp overlap

ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 132 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 117 bp overlap

ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 231 bp overlap

ChIP NB69 GSE101295.CTCF.NB69 180 bp overlap

ChIP SK-N-SH ENCFF731NJX 216 bp overlap

ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 190 bp overlap

ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 189 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 191 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 196 bp overlap

ChIP neural ENCSR822CEA.CTCF.neural 189 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 184 bp overlap

ESR1 3 datasets

ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 197 bp overlap

ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 54 bp overlap

ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 260 bp overlap

EZH2 3 datasets

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 423 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 63 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 91 bp overlap

GATA6 5 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 275 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 318 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 304 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 312 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 318 bp overlap

HIF3A 1 dataset

ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 53 bp overlap

JUN 2 datasets

ChIP 786-O GSE86092.JUN.786-O 264 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 278 bp overlap

MAZ 1 dataset

ChIP HEK293 GSE76494.MAZ.HEK293 176 bp overlap

MYCN 3 datasets

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 248 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 208 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 215 bp overlap

PATZ1 1 dataset

ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 125 bp overlap

PLAG1 1 dataset

ChIP K-562 GSE111469.PLAG1.K-562 106 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 288 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 323 bp overlap

RAD21 4 datasets

ChIP H1 ENCFF698EWO 237 bp overlap

ChIP H1 ENCFF967OJF 236 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 133 bp overlap

ChIP neural cell ENCFF564MOT 388 bp overlap

RFX1 2 datasets

ChIP K-562 ENCSR041AXL.RFX1.K-562 285 bp overlap

ChIP K562 ENCFF809XVG 419 bp overlap

SAFB2 1 dataset

ChIP Hep-G2 GSE120104.SAFB2.Hep-G2 82 bp overlap

SALL2 2 datasets

ChIP HEK293 ENCFF368TYL 115 bp overlap

ChIP HEK293 ENCSR044FMM.SALL2.HEK293 59 bp overlap

SIN3A 2 datasets

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 167 bp overlap

ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 197 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 381 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 437 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 392 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 465 bp overlap

SMARCA4 3 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 465 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 318 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap

SMARCC1 1 dataset

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 465 bp overlap

SMC3 1 dataset

ChIP neural ENCSR404BPV.SMC3.neural 172 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 331 bp overlap

SOX2 1 dataset

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 94 bp overlap

TWIST1 1 dataset

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 105 bp overlap

WT1 3 datasets

ChIP HEK293 ENCFF906HIR 271 bp overlap

ChIP HEK293 ENCFF906HIR 417 bp overlap

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 103 bp overlap

YY1 5 datasets

ChIP H1 ENCFF524BTL 268 bp overlap

ChIP K-562 ENCSR000BMH.YY1.K-562 163 bp overlap

ChIP K562 ENCFF660QRE 273 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 179 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 317 bp overlap

ZBTB48 2 datasets

ChIP HEK293 ENCFF809BPK 110 bp overlap

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 274 bp overlap

ZBTB8A 2 datasets

ChIP HEK293 ENCFF303WRD 427 bp overlap

ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 245 bp overlap

ZFP57 1 dataset

ChIP hESC GSE115387.ZFP57.hESC 345 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 437 bp overlap

ZNF398 2 datasets

ChIP HEK293 ENCFF184XEW 210 bp overlap

ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 76 bp overlap

ZSCAN4 1 dataset

ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 54 bp overlap

Gene	Dist. to TSS	Distance	Link type
LHX1-DT	194.1 kb	Distal	Multiome
LHX1	194.3 kb	Distal	Multiome
GGNBP2	197.6 kb	Distal	Multiome
AATF	206.4 kb	Distal	Multiome
MYO19	207.6 kb	Distal	Multiome
ZNHIT3	255.9 kb	Distal	Multiome

Genome Browser