chr1 : 244,454,544 – 244,454,889
345 bp 36 TFs 2 linked genes
This 345 bp open chromatin element is linked to ADSS2 and CATSPERE and is bound by 36 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ADSS2 2.6 kb Proximal Proximity
CATSPERE 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:244,449,544 – 244,459,889
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP ERP001226.AR.LNCaP 127 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 134 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 345 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 184 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 345 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 345 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 148 bp overlap
BRD4 1 dataset
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 267 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 136 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 328 bp overlap
ELF1 4 datasets
ChIP MCF-7 ENCFF305BNP 180 bp overlap
ChIP MCF-7 ENCFF687CWI 260 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 212 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 161 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 304 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 345 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 345 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 119 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 218 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 206 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 218 bp overlap
ChIP MCF-7_TAMR_E2 GSE86538.ESR1.MCF-7_TAMR_E2 113 bp overlap
ChIP T-47D ENCSR000BQD.ESR1.T-47D 117 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 214 bp overlap
FOXA1 68 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 186 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 136 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 197 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 171 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 172 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 127 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 193 bp overlap
ChIP MCF-7 ENCFF465LTH 309 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 299 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 213 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 217 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 222 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 186 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 156 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 144 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 222 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 240 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 206 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 204 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 152 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 284 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 247 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 277 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 158 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 165 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 224 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 217 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 244 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 191 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 246 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 167 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 305 bp overlap
ChIP T-47D GSE72249.FOXA1.T-47D 242 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 178 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 254 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 205 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 285 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 196 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 253 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 274 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 291 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 266 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 250 bp overlap
ChIP T-47D_JC4746 GSE126004.FOXA1.T-47D_JC4746 209 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 277 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 278 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 258 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 209 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 219 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 193 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 207 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 176 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 312 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 324 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 299 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 312 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 319 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 329 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 217 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 307 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 269 bp overlap
ChIP breast_tumor_Male_1 GSE104399.FOXA1.breast_tumor_Male_1 229 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 223 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 270 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 271 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 109 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 162 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 225 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 126 bp overlap
GRHL1 1 dataset
ChIP MCF-7 GSE140185.GRHL1.MCF-7 290 bp overlap
GRHL2 9 datasets
ChIP HBE GSE46194.GRHL2.HBE 221 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 249 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 244 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 185 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 282 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 276 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 156 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 123 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 260 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 122 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 70 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 103 bp overlap
HSF1 1 dataset
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 147 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 141 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 176 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 157 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 210 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 73 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 345 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 159 bp overlap
SMARCA4 1 dataset
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 164 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 221 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 299 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 281 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 293 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 155 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 268 bp overlap
SMARCD3 2 datasets
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 220 bp overlap
ChIP MCF-7_KO GSE124225.SMARCD3.MCF-7_KO 180 bp overlap
SMARCE1 2 datasets
ChIP MCF-7 ENCFF890MHF 218 bp overlap
ChIP MCF-7 ENCSR431TLD.SMARCE1.MCF-7 183 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 253 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 193 bp overlap
STAT3 9 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 119 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 165 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 273 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 199 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 179 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 172 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 171 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 137 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 155 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 154 bp overlap
TEAD4 1 dataset
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 228 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 120 bp overlap
ZBTB11 3 datasets
ChIP HEK293 ENCFF262GZJ 255 bp overlap
ChIP MCF-7 ENCFF930FLM 210 bp overlap
ChIP MCF-7 ENCSR155VDK.ZBTB11.MCF-7 151 bp overlap
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