chr16 : 72,380,053 72,380,764
711 bp 57 TFs 5 linked genes
This 711 bp open chromatin element is linked to 5 target genes and is bound by 57 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
PMFBP1 208.2 kb Distal Multiome
LINC01572 284.5 kb Distal Multiome
ZFHX3-AS1 284.8 kb Distal Multiome
DHX38 286.6 kb Distal Multiome
TXNL4B 286.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:72,375,053 – 72,385,764
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 319 bp overlap
DUX4 3 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 600 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D17 GSE139377.ERG.aortic-endothelial-cell_D17 131 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 141 bp overlap
FOSL2 1 dataset
ChIP hESC GSE69539.FOSL2.hESC 166 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 337 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 363 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 392 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 403 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 434 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 499 bp overlap
FOXA2 16 datasets
ChIP BJ1-hTERT GSE90454.FOXA2.BJ1-hTERT 246 bp overlap
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 300 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 323 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 249 bp overlap
ChIP BJ1-hTERT_Mimo GSE90454.FOXA2.BJ1-hTERT_Mimo 276 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 229 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 245 bp overlap
ChIP BJ1-hTERT_MimosineRelease GSE90454.FOXA2.BJ1-hTERT_MimosineRelease 219 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 331 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 353 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 258 bp overlap
ChIP DE DE-FOXA2-1 711 bp overlap
ChIP DE DE-FOXA2-2 626 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 267 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 366 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 261 bp overlap
FOXE1 3 datasets
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 507 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 215 bp overlap
GATA1 3 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 184 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 325 bp overlap
ChIP DE DE-GATA4-1 711 bp overlap
ChIP DE DE-GATA4-2 677 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 555 bp overlap
ChIP foregut GSE117136.GATA4.foregut 566 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 676 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 711 bp overlap
GATA6 15 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 226 bp overlap
ChIP DE DE-GATA6-1 711 bp overlap
ChIP DE DE-GATA6-2 696 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 711 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 711 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 711 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 711 bp overlap
ChIP H9 ERP004206.GATA6.H9 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 711 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 711 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 657 bp overlap
ChIP foregut GSE117136.GATA6.foregut 577 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 688 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 358 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 690 bp overlap
HNF1A 2 datasets
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
ChIP HEE_1 GSE76376.HNF1A.HEE_1 208 bp overlap
HNF1B 3 datasets
Motif DE_72h DE_72h-HNF1B_MA0153.2 13 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 362 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 361 bp overlap
HNF4A 2 datasets
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 91 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 198 bp overlap
HOXA10 3 datasets
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap
Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap
HOXB13 3 datasets
Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap
Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
HOXD9 3 datasets
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 711 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 469 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 711 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 711 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 343 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 171 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 711 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 347 bp overlap
LIN54 2 datasets
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
Motif DE_72h DE_72h-LIN54_MA0619.2 7 bp overlap
MAFK 1 dataset
ChIP HepG2 ENCFF743ZOF 241 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 101 bp overlap
Mecom 2 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 284 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 416 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 264 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 451 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 280 bp overlap
Nfe2l2 1 dataset
Motif DE_72h DE_72h-Nfe2l2_MA0150.3 11 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 162 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 228 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 370 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 141 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 559 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 78 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 450 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 132 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 552 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 549 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 108 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 356 bp overlap
SMAD2 3 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 142 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 313 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 695 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 711 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 711 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 711 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 711 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 711 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 675 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 598 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 290 bp overlap
SMAD4 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 180 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 248 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 312 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 343 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 644 bp overlap
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 336 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 183 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 500 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 497 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 316 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 292 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 294 bp overlap
TCF7L1 2 datasets
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 467 bp overlap
ZKSCAN5 3 datasets
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF135 3 datasets
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
ZNF257 3 datasets
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap
ZNF35 2 datasets
Motif DE_36h DE_36h-ZNF35_MA2333.1 7 bp overlap
Motif DE_72h DE_72h-ZNF35_MA2333.1 7 bp overlap
ZNF708 1 dataset
Motif DE_72h DE_72h-ZNF708_MA1730.2 9 bp overlap